RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SSTR1P30872 391 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 ELK3P41970 407 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 SARNPP82979 210 aaKnown RBP19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 ELAVL2Q12926 359 aaKnown RBP19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 ANKRD20A2Q5SQ80 823 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 ANKRD20A1Q5TYW2 823 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 ANKRD20A3Q5VUR7 823 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 ZNF280DQ6N043 979 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 SPATS2Q86XZ4 545 aaKnown RBP19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 SCAMP5Q8TAC9 235 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 DHRS4Q9BTZ2 278 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 SMOC2Q9H3U7 446 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 XAB2Q9HCS7 855 aaKnown RBP19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 EIF2B3Q9NR50 452 aaKnown RBP19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 TBK1Q9UHD2 729 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 CHMP2BQ9UQN3 213 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 PCDHB5Q9Y5E4 795 aa19.46■□□□□ 0.71
SEMA3D-202ENST00000444867 TMEM120BA0PK00 339 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 FAM72CH0Y354 149 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 I6L893 689 aaPredicted RBP19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 EBAG9O00559 213 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 IRAK2O43187 625 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 METTL18O95568 372 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 SERPINB6P35237 376 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 MAGEA3P43357 314 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 SEC24CP53992 1094 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 FAM72AQ5TYM5 149 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 FAM72DQ6L9T8 149 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 CAPN12Q6ZSI9 719 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 TRABD2AQ86V40 505 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 FAM72BQ86X60 149 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 NPAS4Q8IUM7 802 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 ARHGAP18Q8N392 663 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 FBF1Q8TES7 1133 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 CYTH2Q99418 400 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 OXCT2Q9BYC2 517 aaPredicted RBP19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 FBXO44Q9H4M3 255 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 PRDM12Q9H4Q4 367 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 ARHGEF38Q9NXL2 777 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 ABI2Q9NYB9 513 aaPredicted RBP19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 SCML2Q9UQR0 700 aa19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 FNDC1Q4ZHG4 1894 aaPredicted RBP19.45■□□□□ 0.7
SEMA3D-202ENST00000444867 RASA4BC9J798 803 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 MTSS1O43312 755 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 RASA4O43374 803 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 OR4Q2P0C623 313 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 MLNP12872 115 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 MX2P20592 715 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 FGFR3P22607 806 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 CCT5P48643 541 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 AP1B1Q10567 949 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 CTXN3Q4LDR2 81 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 FAXCQ5TGI0 409 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 FOXR1Q6PIV2 292 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 ADGRD1Q6QNK2 874 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 CAND1Q86VP6 1230 aaKnown RBP19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 SCN4BQ8IWT1 228 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 NUP93Q8N1F7 819 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 RNF34Q969K3 372 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 P2RY11Q96G91 374 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 DEFB118Q96PH6 123 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 HAPLN3Q96S86 360 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 LGMNQ99538 433 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 OR12D3Q9UGF7 316 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 SCN5AQ14524 2016 aa19.44■□□□□ 0.7
SEMA3D-202ENST00000444867 RNF103O00237 685 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 CXCL10P02778 98 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 STX2P32856 288 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 SLC18A1P54219 525 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 SMARCB1Q12824 385 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 PPP2R5DQ14738 602 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 PARP6Q2NL67 630 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 FAM171A1Q5VUB5 890 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 SRRM1Q8IYB3 904 aaKnown RBP19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 CRIPAKQ8N1N5 446 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 CCNYQ8ND76 341 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 LRRN4Q8WUT4 740 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 CHMP6Q96FZ7 201 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 KCNK9Q9NPC2 374 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 RSPH14Q9UHP6 348 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 TRDMT1O14717 391 aaKnown RBP19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 PPIDQ08752 370 aaKnown RBP19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 ANKRD33Q7Z3H0 272 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 SCD5Q86SK9 330 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 MON1AQ86VX9 555 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 IGDCC3Q8IVU1 814 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 COLGALT1Q8NBJ5 622 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 RABEP2Q9H5N1 569 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 MARCH5Q9NX47 278 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 NKIRAS1Q9NYS0 192 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 IGSF9Q9P2J2 1179 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 GGA2Q9UJY4 613 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 DNAH12Q6ZR08 3092 aa19.43■□□□□ 0.7
SEMA3D-202ENST00000444867 MICAL3Q7RTP6 2002 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 H7C4K7 107 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 PRPF4O43172 522 aaKnown RBP eCLIP19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 PQBP1O60828 265 aaKnown RBP19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 LRIG2O94898 1065 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 AMHP03971 560 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 KRT15P19012 456 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms