RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 OGDHLQ9ULD0 1010 aa16.18■□□□□ 0.18
SNX13-204ENST00000444712 TMEM120BA0PK00 339 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 IRAK2O43187 625 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 ELK3P41970 407 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 AP1B1Q10567 949 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 CTXN3Q4LDR2 81 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 SCN4BQ8IWT1 228 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 NUP93Q8N1F7 819 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 MDM1Q8TC05 714 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 ZNF473Q8WTR7 871 aaKnown RBP16.17■□□□□ 0.18
SNX13-204ENST00000444712 ATXN2LQ8WWM7 1075 aaKnown RBP16.17■□□□□ 0.18
SNX13-204ENST00000444712 HAPLN3Q96S86 360 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 TMPRSS4Q9NRS4 437 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 ARHGEF38Q9NXL2 777 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 NKIRAS1Q9NYS0 192 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 OR12D3Q9UGF7 316 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 CHMP2BQ9UQN3 213 aa16.17■□□□□ 0.18
SNX13-204ENST00000444712 H7C4K7 107 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 BANF1O75531 89 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 MLNP12872 115 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 VAV1P15498 845 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 GCAP28676 217 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SSTR1P30872 391 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 CCT5P48643 541 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SLC18A1P54219 525 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 CAPN12Q6ZSI9 719 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 MICALCLQ6ZW33 695 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 TRABD2AQ86V40 505 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SRRM1Q8IYB3 904 aaKnown RBP16.16■□□□□ 0.18
SNX13-204ENST00000444712 CNPY4Q8N129 248 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 CCNYQ8ND76 341 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 FBF1Q8TES7 1133 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 DYDC1Q8WWB3 177 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 CHMP6Q96FZ7 201 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 FAM107BQ9H098 131 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 KCNK9Q9NPC2 374 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SCML2Q9UQR0 700 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 KRT15P19012 456 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 CCR1P32246 355 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SEC24CP53992 1094 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 ZNF33AQ06730 810 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 EIF4EBP2Q13542 120 aaPredicted RBP16.16■□□□□ 0.18
SNX13-204ENST00000444712 MRPL58Q14197 206 aaKnown RBP16.16■□□□□ 0.18
SNX13-204ENST00000444712 PPP2R5DQ14738 602 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 FAM171A1Q5VUB5 890 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 ADGRD1Q6QNK2 874 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 MON1AQ86VX9 555 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SCAMP5Q8TAC9 235 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 HDAC11Q96DB2 347 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 P2RY11Q96G91 374 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SGSM3Q96HU1 749 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SERPINB11Q96P15 392 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 LGMNQ99538 433 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 NSRP1Q9H0G5 558 aaKnown RBP16.16■□□□□ 0.18
SNX13-204ENST00000444712 PRDM12Q9H4Q4 367 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 RSPH14Q9UHP6 348 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 GGA2Q9UJY4 613 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SMG5Q9UPR3 1016 aaKnown RBP16.16■□□□□ 0.18
SNX13-204ENST00000444712 MFHAS1Q9Y4C4 1052 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 IKBKGQ9Y6K9 419 aa16.16■□□□□ 0.18
SNX13-204ENST00000444712 SCN5AQ14524 2016 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 MICAL3Q7RTP6 2002 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 RNF103O00237 685 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 TRDMT1O14717 391 aaKnown RBP16.15■□□□□ 0.18
SNX13-204ENST00000444712 METTL18O95568 372 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 CXCL10P02778 98 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 FGFR3P22607 806 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 MSH2P43246 934 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 MAGEA3P43357 314 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 COG7P83436 770 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 PPIDQ08752 370 aaKnown RBP16.15■□□□□ 0.18
SNX13-204ENST00000444712 GPNMBQ14956 572 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 PARP6Q2NL67 630 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 FAXCQ5TGI0 409 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 CTU1Q7Z7A3 348 aaKnown RBP16.15■□□□□ 0.18
SNX13-204ENST00000444712 CYP4X1Q8N118 509 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 COLGALT1Q8NBJ5 622 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 SPPL2BQ8TCT7 592 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 C2orf15Q8WU43 125 aaKnown RBP16.15■□□□□ 0.18
SNX13-204ENST00000444712 DEFB118Q96PH6 123 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 SMC6Q96SB8 1091 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 VAT1Q99536 393 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 WDR83Q9BRX9 315 aaKnown RBP16.15■□□□□ 0.18
SNX13-204ENST00000444712 DHRS4Q9BTZ2 278 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 SSU72Q9NP77 194 aaKnown RBP16.15■□□□□ 0.18
SNX13-204ENST00000444712 COMMD8Q9NX08 183 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 IGSF9Q9P2J2 1179 aa16.15■□□□□ 0.18
SNX13-204ENST00000444712 FAM72CH0Y354 149 aa16.14■□□□□ 0.17
SNX13-204ENST00000444712 FGF10O15520 208 aaPredicted RBP16.14■□□□□ 0.17
SNX13-204ENST00000444712 PRPF4O43172 522 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX13-204ENST00000444712 PQBP1O60828 265 aaKnown RBP16.14■□□□□ 0.17
SNX13-204ENST00000444712 RTN3O95197 1032 aaPredicted RBP16.14■□□□□ 0.17
SNX13-204ENST00000444712 CPP00450 1065 aa16.14■□□□□ 0.17
SNX13-204ENST00000444712 OR4Q2P0C623 313 aa16.14■□□□□ 0.17
SNX13-204ENST00000444712 EPHB2P29323 1055 aa16.14■□□□□ 0.17
SNX13-204ENST00000444712 GBP2P32456 591 aaPredicted RBP16.14■□□□□ 0.17
SNX13-204ENST00000444712 IFRD2Q12894 506 aaPredicted RBP16.14■□□□□ 0.17
SNX13-204ENST00000444712 FAM72AQ5TYM5 149 aa16.14■□□□□ 0.17
SNX13-204ENST00000444712 FAM72DQ6L9T8 149 aa16.14■□□□□ 0.17
SNX13-204ENST00000444712 ANKRD33Q7Z3H0 272 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms