RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 RPL7AP62424 266 aaKnown RBP14.61□□□□□ -0.07
SSBP3-208ENST00000444533 PITX1P78337 314 aaPredicted RBP14.61□□□□□ -0.07
SSBP3-208ENST00000444533 ACAP1Q15027 740 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 FBXO43Q4G163 708 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 MPP7Q5T2T1 576 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 GRAMD4Q6IC98 578 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 SCYL2Q6P3W7 929 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 FAM131BQ86XD5 332 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 FAM217AQ8IXS0 508 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 PJA1Q8NG27 643 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 FNIP1Q8TF40 1166 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 NUP85Q9BW27 656 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 SLC2A11Q9BYW1 496 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 SIK2Q9H0K1 926 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 ARHGEF4Q9NR80 690 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 SPTLC3Q9NUV7 552 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 DNAJC17Q9NVM6 304 aaKnown RBP14.61□□□□□ -0.07
SSBP3-208ENST00000444533 UVRAGQ9P2Y5 699 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 IP6K2Q9UHH9 426 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 TBC1D3BA6NDS4 549 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 OTOL1A6NHN0 477 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-208ENST00000444533 CACNG3O60359 315 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 GJB6O95452 261 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 CYP1A2P05177 515 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 TMEM253P0C7T8 217 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 TACR2P21452 398 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 GRIA2P42262 883 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 DGKGP49619 791 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 AIF1P55008 147 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 PIGHQ14442 188 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-208ENST00000444533 C15orf59Q2T9L4 293 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-208ENST00000444533 ASTE1Q2TB18 679 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-208ENST00000444533 PPP1R15BQ5SWA1 713 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 RAP1GAP2Q684P5 730 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 RHOT2Q8IXI1 618 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 LGI2Q8N0V4 545 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 SYNPOQ8N3V7 929 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 NAT16Q8N8M0 369 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 OLIG1Q8TAK6 271 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 RPRD1AQ96P16 312 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-208ENST00000444533 HAPLN3Q96S86 360 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 PPP1R9BQ96SB3 815 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 FOXQ1Q9C009 403 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 ARHGEF38Q9NXL2 777 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 PLK2Q9NYY3 685 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 ANAPC7Q9UJX3 599 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 INTUQ9ULD6 942 aa14.6□□□□□ -0.07
SSBP3-208ENST00000444533 KIF26AQ9ULI4 1882 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-208ENST00000444533 TCRBV5S1A1TA0A578 114 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 TMEM191CA6NGB0 347 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 CCP110O43303 1012 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 PRPSAP2O60256 369 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 TBL1XO60907 577 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 PAGE1O75459 146 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 ENDOD1O94919 500 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 AOC1P19801 751 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 MAGEA1P43355 309 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 GALK1P51570 392 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 OXCT1P55809 520 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 KRT83P78385 493 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 EIF4EBP2Q13542 120 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-208ENST00000444533 CDH18Q13634 790 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 MS4A13Q5J8X5 152 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 EFHC2Q5JST6 749 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 PIK3R6Q5UE93 754 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 RFWD3Q6PCD5 774 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 SLFN11Q7Z7L1 901 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 DNAAF5Q86Y56 855 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 CCDC112Q8NEF3 446 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 ZNF564Q8TBZ8 553 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-208ENST00000444533 UCMAQ8WVF2 138 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 IER2Q9BTL4 223 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 LMAN1LQ9HAT1 526 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 STIM2Q9P246 746 aa14.59□□□□□ -0.07
SSBP3-208ENST00000444533 GOLGA6L7A0A1B0GV03 622 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 EIF3CLB5ME19 914 aaKnown RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 H0Y626 953 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 ATG13O75143 517 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 TULP3O75386 442 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 KAT7O95251 611 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 MOCS3O95396 460 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 PENKP01210 267 aaPredicted RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 TFE3P19532 575 aaPredicted RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 TARSP26639 723 aaKnown RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 SSR1P43307 286 aaKnown RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 KDSRQ06136 332 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 FAM133BQ5BKY9 247 aaKnown RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 TMEM196Q5HYL7 178 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 IER5LQ5T953 404 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 FYB2Q5VWT5 728 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 TRNP1Q6NT89 227 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 MFN1Q8IWA4 741 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 CENPIQ92674 756 aaPredicted RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 CHFRQ96EP1 664 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 C1orf74Q96LT6 269 aa14.58□□□□□ -0.08
SSBP3-208ENST00000444533 EIF3CQ99613 913 aaKnown RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 EPN1Q9Y6I3 576 aaPredicted RBP14.58□□□□□ -0.08
SSBP3-208ENST00000444533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.57□□□□□ -0.08
SSBP3-208ENST00000444533 A0A1B0GVM2 712 aa14.57□□□□□ -0.08
SSBP3-208ENST00000444533 TCAF2A6NFQ2 919 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms