RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 PACSIN1Q9BY11 444 aa17.8■□□□□ 0.44
AP1S3-207ENST00000444408 LMAN1LQ9HAT1 526 aa17.8■□□□□ 0.44
AP1S3-207ENST00000444408 SPTLC3Q9NUV7 552 aa17.8■□□□□ 0.44
AP1S3-207ENST00000444408 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.8■□□□□ 0.44
AP1S3-207ENST00000444408 ZNHIT6Q9NWK9 470 aaKnown RBP17.8■□□□□ 0.44
AP1S3-207ENST00000444408 MARK1Q9P0L2 795 aa17.8■□□□□ 0.44
AP1S3-207ENST00000444408 CNOT8Q9UFF9 292 aaKnown RBP17.8■□□□□ 0.44
AP1S3-207ENST00000444408 STAP1Q9ULZ2 295 aa17.8■□□□□ 0.44
AP1S3-207ENST00000444408 TULP3O75386 442 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 PENKP01210 267 aaPredicted RBP17.79■□□□□ 0.44
AP1S3-207ENST00000444408 APOEP02649 317 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 GPD1P21695 349 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 CCR1P32246 355 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 SLC11A2P49281 568 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 CXCR3P49682 368 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
AP1S3-207ENST00000444408 GAS6Q14393 721 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 TSR1Q2NL82 804 aaKnown RBP17.79■□□□□ 0.44
AP1S3-207ENST00000444408 PIK3R6Q5UE93 754 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 VPS36Q86VN1 386 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 FAM131BQ86XD5 332 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 PHTF2Q8N3S3 785 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 ARHGEF26Q96DR7 871 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 PGAP3Q96FM1 320 aaPredicted RBP17.79■□□□□ 0.44
AP1S3-207ENST00000444408 MSANTD3Q96H12 275 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 MAGEB5Q9BZ81 275 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 THAP2Q9H0W7 228 aa17.79■□□□□ 0.44
AP1S3-207ENST00000444408 NHEJ1Q9H9Q4 299 aaPredicted RBP17.79■□□□□ 0.44
AP1S3-207ENST00000444408 MRPS17Q9Y2R5 130 aaKnown RBP17.79■□□□□ 0.44
AP1S3-207ENST00000444408 CFAP54Q96N23 3096 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 CCP110O43303 1012 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 ENDOD1O94919 500 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 LATS1O95835 1130 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 SDC4P31431 198 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 CHKAP35790 457 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 RPS24P62847 133 aaKnown RBP17.78■□□□□ 0.44
AP1S3-207ENST00000444408 ZNF252P-AS1Q0IIN9 211 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 CCINQ13939 588 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 PPP2R5DQ14738 602 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 MS4A13Q5J8X5 152 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 PKN3Q6P5Z2 889 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 C14orf80Q86SX3 495 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 CFAP52Q8N1V2 620 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 DDI1Q8WTU0 396 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 ATOH1Q92858 354 aaPredicted RBP17.78■□□□□ 0.44
AP1S3-207ENST00000444408 AZIN2Q96A70 460 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 CLDN23Q96B33 292 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 BTN2A3PQ96KV6 586 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 NELL2Q99435 816 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 PRMT1Q99873 361 aaKnown RBP17.78■□□□□ 0.44
AP1S3-207ENST00000444408 TKTL2Q9H0I9 626 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 PARVAQ9NVD7 372 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 DNAJC17Q9NVM6 304 aaKnown RBP17.78■□□□□ 0.44
AP1S3-207ENST00000444408 POLR3BQ9NW08 1133 aaPredicted RBP17.78■□□□□ 0.44
AP1S3-207ENST00000444408 RRN3Q9NYV6 651 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 STIM2Q9P246 746 aa17.78■□□□□ 0.44
AP1S3-207ENST00000444408 SSU72P8A0A1W2PR75 194 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 CACNG3O60359 315 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 PAGE1O75459 146 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 CISD3P0C7P0 127 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 TACR2P21452 398 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 HOXD9P28356 352 aaPredicted RBP17.77■□□□□ 0.44
AP1S3-207ENST00000444408 HOXC13P31276 330 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 RDXP35241 583 aaKnown RBP17.77■□□□□ 0.44
AP1S3-207ENST00000444408 PTPN9P43378 593 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 IRAK1P51617 712 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 GALCP54803 685 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 HDAC4P56524 1084 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 AMPD2Q01433 879 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 GRSF1Q12849 480 aaKnown RBP eCLIP17.77■□□□□ 0.44
AP1S3-207ENST00000444408 SLC18A3Q16572 532 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 PPP1R2P3Q6NXS1 205 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 DCUN1D2Q6PH85 259 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 CHSY1Q86X52 802 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 CIR1Q86X95 450 aaPredicted RBP17.77■□□□□ 0.44
AP1S3-207ENST00000444408 LGI2Q8N0V4 545 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 ATP6V0D2Q8N8Y2 350 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 WFDC5Q8TCV5 224 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 FAM172AQ8WUF8 416 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 CENPIQ92674 756 aaPredicted RBP17.77■□□□□ 0.44
AP1S3-207ENST00000444408 TMA16Q96EY4 203 aaKnown RBP17.77■□□□□ 0.44
AP1S3-207ENST00000444408 PNKPQ96T60 521 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 OSBPL6Q9BZF3 934 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 SIK2Q9H0K1 926 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 DEF6Q9H4E7 631 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 WDCPQ9H6R7 721 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 ZDHHC4Q9NPG8 344 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 ARHGEF4Q9NR80 690 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 FAM86C1Q9NVL1 165 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 C2orf42Q9NWW7 574 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 ARHGEF38Q9NXL2 777 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 HS3ST4Q9Y661 456 aa17.77■□□□□ 0.44
AP1S3-207ENST00000444408 TMEM191CA6NGB0 347 aa17.76■□□□□ 0.43
AP1S3-207ENST00000444408 K7EQS6 105 aa17.76■□□□□ 0.43
AP1S3-207ENST00000444408 AKR1B10O60218 316 aa17.76■□□□□ 0.43
AP1S3-207ENST00000444408 TBL1XO60907 577 aa17.76■□□□□ 0.43
AP1S3-207ENST00000444408 CDC25BP30305 580 aa17.76■□□□□ 0.43
AP1S3-207ENST00000444408 ZNF143P52747 638 aaPredicted RBP17.76■□□□□ 0.43
AP1S3-207ENST00000444408 SEC13P55735 322 aa17.76■□□□□ 0.43
AP1S3-207ENST00000444408 MPPE1Q53F39 396 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms