RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PTPN20Q4JDL3 420 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 ZNF470Q6ECI4 717 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 POLNQ7Z5Q5 900 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 APBA2Q99767 749 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 FBXO44Q9H4M3 255 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 HOXA2O43364 376 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 TRIM13O60858 407 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 TOMM70O94826 608 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 SMIM10L2AP0DMW4 78 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 SMIM10L2BP0DMW5 78 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 C16orf46Q6P387 395 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 PHF21BQ96EK2 531 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 TBC1D13Q9NVG8 400 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 UMODL1Q5DID0 1318 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 DDX3YO15523 660 aaKnown RBP22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 GLP2RO95838 553 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 KRT16P08779 473 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 RASGEF1CQ8N431 466 aa22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 TDRD5Q8NAT2 981 aaKnown RBP22.98■■□□□ 1.27
CTDSPL-206ENST00000443503 POLD3Q15054 466 aaPredicted RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 CARNMT1Q8N4J0 409 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 SOCS4Q8WXH5 440 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 OR12D3Q9UGF7 316 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 VIRMAQ69YN4 1812 aaKnown RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 SYNDIG1LA6NDD5 238 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 H2AFYO75367 372 aaKnown RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 ITGAVP06756 1048 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 EXOC3L1Q86VI1 746 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 FAR2Q96K12 515 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 ADNPQ9H2P0 1102 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 ST6GALNAC4Q9H4F1 302 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 NRDE2Q9H7Z3 1164 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 THAP1Q9NVV9 213 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 R3HDM2Q9Y2K5 976 aaKnown RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 A0A0A0MRY4 1105 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 TCRBV7S2A1N4TA0A589 114 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 ERI2A8K979 691 aaKnown RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 PSMB4P28070 264 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 SLC1A6P48664 564 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 MRPS35P82673 323 aaKnown RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 ELAVL2Q12926 359 aaKnown RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 TTLL9Q3SXZ7 439 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 ANKRD52Q8NB46 1076 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 CNDP1Q96KN2 507 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 SPATA13Q96N96 652 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 SERPINB11Q96P15 392 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 GPR20Q99678 358 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 TCF7L2Q9NQB0 619 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 TLR8Q9NR97 1041 aaKnown RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 SPTLC1O15269 473 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 PGK1P00558 417 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 OR1E1P30953 314 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 PDPK2PQ6A1A2 396 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 POU5F2Q8N7G0 328 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 LRRC57Q8N9N7 239 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 B3GALNT2Q8NCR0 500 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 PDGFDQ9GZP0 370 aaPredicted RBP22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 BRD8Q9H0E9 1235 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 PRDM12Q9H4Q4 367 aa22.97■■□□□ 1.27
CTDSPL-206ENST00000443503 DCDC2CA8MYV0 355 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 ERVK-10P10266 1014 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 DDI1Q8WTU0 396 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 SMPD4Q9NXE4 827 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 KANSL3Q9P2N6 904 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 KCPQ6ZWJ8 1503 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 TRDMT1O14717 391 aaKnown RBP22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 DNAJB2P25686 324 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 RHOAP61586 193 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 GTF2H3Q13889 308 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 ADCK2Q7Z695 626 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 TMEM86AQ8N2M4 240 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 LZTR1Q8N653 840 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 CHADO15335 359 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 CRTAMO95727 393 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 SLC39A12Q504Y0 691 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 LRRC23Q53EV4 343 aaPredicted RBP22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 GPR142Q7Z601 462 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 DEFB128Q7Z7B8 93 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 ZNF333Q96JL9 665 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 NPY2RP49146 381 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 JAM2P57087 298 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 OCA2Q04671 838 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 CYLC2Q14093 348 aaPredicted RBP22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 AARS2Q5JTZ9 985 aaKnown RBP22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 GRTP1Q5TC63 336 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 BNC2Q6ZN30 1099 aaPredicted RBP22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 CYGBQ8WWM9 190 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 USP13Q92995 863 aaPredicted RBP22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 CENPTQ96BT3 561 aa22.96■■□□□ 1.27
CTDSPL-206ENST00000443503 DDHD2O94830 711 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 SERPIND1P05546 499 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 HIRAP54198 1017 aaPredicted RBP22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 DDX39BQ13838 428 aaKnown RBP22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 PPP1R26Q5T8A7 1209 aaPredicted RBP22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 MBOAT7Q96N66 472 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 UBXN6Q9BZV1 441 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 DHX33Q9H6R0 707 aaKnown RBP22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 SCUBE2Q9NQ36 999 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 DMAC2Q9NW81 257 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 EGFRP00533 1210 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms