RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 FSBPO95073 299 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 HLA-DRAP01903 254 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 TRIM21P19474 475 aaKnown RBP15.05■□□□□ -0
HMGN1-208ENST00000443046 HNF1BP35680 557 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 CLDN6P56747 220 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 FNDC3BQ53EP0 1204 aaKnown RBP15.05■□□□□ -0
HMGN1-208ENST00000443046 MPPE1Q53F39 396 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 C6orf118Q5T5N4 469 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 SHC4Q6S5L8 630 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 PCSK4Q6UW60 755 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 ZNF366Q8N895 744 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 SNIP1Q8TAD8 396 aaKnown RBP15.05■□□□□ -0
HMGN1-208ENST00000443046 SAP25Q8TEE9 199 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 WFIKKN2Q8TEU8 576 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 CYB5D2Q8WUJ1 264 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 PLD4Q96BZ4 506 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 ELF4Q99607 663 aaPredicted RBP15.05■□□□□ -0
HMGN1-208ENST00000443046 BLZF1Q9H2G9 400 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 EBF2Q9HAK2 575 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 PLA2G4CQ9UP65 541 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 COL6A6A6NMZ7 2263 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 A0A1W2PPC4 97 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 SLC12A8A0AV02 714 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 CBX4O00257 560 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 SPTLC2O15270 562 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 RFPL3O75679 317 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 CLSTN1O94985 981 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 DNTTP04053 509 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 WNT1P04628 370 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 JUPP14923 745 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 ACADVLP49748 655 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 ARID5AQ03989 594 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 TARDBPQ13148 414 aaKnown RBP eCLIP15.04■□□□□ -09e-9■■■□□ 17.5
HMGN1-208ENST00000443046 KIAA0895LQ68EN5 471 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 PM20D1Q6GTS8 502 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 FBXL19Q6PCT2 694 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 LRRC69Q6ZNQ3 347 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 USP30Q70CQ3 517 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 BHLHA9Q7RTU4 235 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 GATAD2AQ86YP4 633 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 CACTIN-AS1Q8N1I8 211 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 ARHGAP18Q8N392 663 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 GOLGA1Q92805 767 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 ACE2Q9BYF1 805 aaPredicted RBP15.04■□□□□ -0
HMGN1-208ENST00000443046 RSPH9Q9H1X1 276 aaPredicted RBP15.04■□□□□ -0
HMGN1-208ENST00000443046 KCTD10Q9H3F6 313 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 ZSCAN16Q9H4T2 348 aaPredicted RBP15.04■□□□□ -0
HMGN1-208ENST00000443046 STRIP2Q9ULQ0 834 aa15.04■□□□□ -0
HMGN1-208ENST00000443046 KLRC4O43908 158 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 LDOC1O95751 146 aaPredicted RBP15.03■□□□□ -0
HMGN1-208ENST00000443046 DLDP09622 509 aaKnown RBP15.03■□□□□ -0
HMGN1-208ENST00000443046 ZNF445P59923 1031 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 YWHAGP61981 247 aaKnown RBP eCLIP15.03■□□□□ -0
HMGN1-208ENST00000443046 SEMG2Q02383 582 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 STK4Q13043 487 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 DNAJC3Q13217 504 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 CUL4BQ13620 913 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 STK38Q15208 465 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 PRAMEF14Q5SWL7 426 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 CHST9Q7L1S5 443 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 ADAT2Q7Z6V5 191 aaKnown RBP15.03■□□□□ -0
HMGN1-208ENST00000443046 AHI1Q8N157 1196 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 KIAA0895Q8NCT3 520 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 MYO19Q96H55 970 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 CNDP2Q96KP4 475 aaKnown RBP15.03■□□□□ -0
HMGN1-208ENST00000443046 FCRL3Q96P31 734 aaPredicted RBP15.03■□□□□ -0
HMGN1-208ENST00000443046 ARID3AQ99856 593 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 ABCB8Q9NUT2 735 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 GGA2Q9UJY4 613 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 SCML1Q9UN30 329 aa15.03■□□□□ -0
HMGN1-208ENST00000443046 BOD1L1Q8NFC6 3051 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 COL12A1Q99715 3063 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 TEX51A0A1B0GUA7 166 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 A0A1W2PR77 199 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 PDXKO00764 312 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 RRP8O43159 456 aaKnown RBP15.02■□□□□ -0
HMGN1-208ENST00000443046 CUTAO60888 179 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 PABPC1P11940 636 aaKnown RBP15.02■□□□□ -0
HMGN1-208ENST00000443046 PIK3CAP42336 1068 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 GALCP54803 685 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 C21orf59P57076 290 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 MCCD1P59942 119 aaPredicted RBP15.02■□□□□ -0
HMGN1-208ENST00000443046 KCNJ12Q14500 433 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 TTC31Q49AM3 519 aaPredicted RBP15.02■□□□□ -0
HMGN1-208ENST00000443046 HES3Q5TGS1 186 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 MBLAC2Q68D91 279 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 ZNF776Q68DI1 518 aaPredicted RBP15.02■□□□□ -0
HMGN1-208ENST00000443046 GPR155Q7Z3F1 870 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 ZNF605Q86T29 641 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 PIGZQ86VD9 579 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 RFFLQ8WZ73 363 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 LMLNQ96KR4 655 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 SLC6A18Q96N87 628 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 NIF3L1Q9GZT8 377 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 PABPC3Q9H361 631 aaKnown RBP15.02■□□□□ -0
HMGN1-208ENST00000443046 SUN2Q9UH99 717 aa15.02■□□□□ -0
HMGN1-208ENST00000443046 MAPK13O15264 365 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 YKT6O15498 198 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 POLR2DO15514 142 aaKnown RBP15.01□□□□□ -0.01
HMGN1-208ENST00000443046 KIF20AO95235 890 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms