RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 RASAL2Q9UJF2 1139 aa10.46□□□□□ -0.73
SYN3-204ENST00000441821 SCML1Q9UN30 329 aa10.46□□□□□ -0.73
SYN3-204ENST00000441821 CLCA2Q9UQC9 943 aa10.46□□□□□ -0.73
SYN3-204ENST00000441821 NCKAP1Q9Y2A7 1128 aa10.46□□□□□ -0.73
SYN3-204ENST00000441821 USP3Q9Y6I4 520 aa10.46□□□□□ -0.73
SYN3-204ENST00000441821 MYLKQ15746 1914 aa10.46□□□□□ -0.74
SYN3-204ENST00000441821 KNTC1P50748 2209 aa10.46□□□□□ -0.74
SYN3-204ENST00000441821 HECTD1Q9ULT8 2610 aa10.46□□□□□ -0.74
SYN3-204ENST00000441821 NUMA1Q14980 2115 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 PLXNA2O75051 1894 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 UBE4BO95155 1302 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 STX6O43752 255 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 CLSTN1O94985 981 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 VNN1O95497 513 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 WNT1P04628 370 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 CKMT2P17540 419 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
SYN3-204ENST00000441821 HOXD9P28356 352 aaPredicted RBP10.45□□□□□ -0.74
SYN3-204ENST00000441821 CD38P28907 300 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 EPHA8P29322 1005 aaPredicted RBP10.45□□□□□ -0.74
SYN3-204ENST00000441821 HLA-FP30511 346 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 ARRB1P49407 418 aaPredicted RBP10.45□□□□□ -0.74
SYN3-204ENST00000441821 TMPRSS3P57727 454 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 EFEMP1Q12805 493 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 SGSM1Q2NKQ1 1148 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 MPPE1Q53F39 396 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 BROXQ5VW32 411 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 ZNF776Q68DI1 518 aaPredicted RBP10.45□□□□□ -0.74
SYN3-204ENST00000441821 KIAA0907Q7Z7F0 614 aaPredicted RBP10.45□□□□□ -0.74
SYN3-204ENST00000441821 ADIPOR2Q86V24 386 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 FMNL3Q8IVF7 1028 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 C12orf56Q8IXR9 622 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 ZNF366Q8N895 744 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.45□□□□□ -0.74
SYN3-204ENST00000441821 FAM181AQ8N9Y4 354 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 PLEKHO2Q8TD55 490 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 PARD3BQ8TEW8 1205 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 ELMO3Q96BJ8 720 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 LGMNQ99538 433 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 TNMDQ9H2S6 317 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 ERVMER34-1Q9H9K5 563 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 EBF2Q9HAK2 575 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 GDF3Q9NR23 364 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 CGNQ9P2M7 1197 aaKnown RBP10.45□□□□□ -0.74
SYN3-204ENST00000441821 SUN2Q9UH99 717 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 STRIP2Q9ULQ0 834 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 SMC3Q9UQE7 1217 aa10.45□□□□□ -0.74
SYN3-204ENST00000441821 TP53BP1Q12888 1972 aaPredicted RBP10.45□□□□□ -0.74
SYN3-204ENST00000441821 A0A1W2PR77 199 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 FAM47DPA6NHR8 397 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 C10orf142B7Z368 130 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 RPN1P04843 607 aaKnown RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 ATP5BP06576 529 aaKnown RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 DLDP09622 509 aaKnown RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 C6P13671 934 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 ACP1P24666 158 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 RXRGP48443 463 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 GALCP54803 685 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 PCBP4P57723 403 aaKnown RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 INSM1Q01101 510 aaPredicted RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 SFSWAPQ12872 951 aaKnown RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 FAM26FQ5R3K3 315 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 SFMBT2Q5VUG0 894 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 CHST9Q7L1S5 443 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 AHI1Q8N157 1196 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 OXR1Q8N573 874 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 TAF4BQ92750 862 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 PLD4Q96BZ4 506 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 HIC2Q96JB3 615 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 ZNF578Q96N58 590 aaPredicted RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 SEMA4CQ9C0C4 833 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 RSPH9Q9H1X1 276 aaPredicted RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 PABPC3Q9H361 631 aaKnown RBP10.44□□□□□ -0.74
SYN3-204ENST00000441821 AASDHPPTQ9NRN7 309 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 KBTBD4Q9NVX7 518 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 MARCH2Q9P0N8 246 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 ADAMTS1Q9UHI8 967 aa10.44□□□□□ -0.74
SYN3-204ENST00000441821 UBR5O95071 2799 aaPredicted RBP10.43□□□□□ -0.74
SYN3-204ENST00000441821 SLC12A8A0AV02 714 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 LRRC72A6NJI9 287 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 LRRIQ3A6PVS8 624 aaPredicted RBP10.43□□□□□ -0.74
SYN3-204ENST00000441821 K7ELQ4 463 aaPredicted RBP10.43□□□□□ -0.74
SYN3-204ENST00000441821 TLR4O00206 839 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 EXOC3O60645 756 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 WISP1O95388 367 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 ASPAP45381 313 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 NXPH1P58417 271 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 ZNF445P59923 1031 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 E2F1Q01094 437 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 AMPD3Q01432 767 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 INCA1Q0VD86 236 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 BNIP3Q12983 259 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 KCNJ12Q14500 433 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 TRIP4Q15650 581 aaPredicted RBP10.43□□□□□ -0.74
SYN3-204ENST00000441821 ARHGAP40Q5TG30 622 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 CNNM4Q6P4Q7 775 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 NCEH1Q6PIU2 408 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 KANSL1Q7Z3B3 1105 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 NELFCDQ8IXH7 590 aa10.43□□□□□ -0.74
SYN3-204ENST00000441821 ZC3H3Q8IXZ2 948 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms