RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 IZUMO1Q8IYV9 350 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 SYNE4Q8N205 404 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM109AQ8N4B1 249 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 SUPT20HQ8NEM7 779 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 OR56A1Q8NGH5 318 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 OSCP1Q8WVF1 389 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZFPM2Q8WW38 1151 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 ATG4AQ8WYN0 398 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D5Q92609 795 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 REXO4Q9GZR2 422 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 KCNK9Q9NPC2 374 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 FBXO28Q9NVF7 368 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 SARDHQ9UL12 918 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 CORO1CQ9ULV4 474 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 DRG1Q9Y295 367 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 UBE2J1Q9Y385 318 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZNF711Q9Y462 761 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 THOC2Q8NI27 1593 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 CARMIL2Q6F5E8 1435 aa4.42□□□□□ -1.7
CDC42BPA-207ENST00000441725 A0A1B0GTW7 788 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 HNRNPRO43390 633 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 B4GALT3O60512 393 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 BEST1O76090 585 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 TPM2P07951 284 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 PI3P19957 117 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 TIRAPP58753 221 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 NHLH2Q02577 135 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 OCA2Q04671 838 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 DYRK1AQ13627 763 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 GRM7Q14831 915 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 RASA2Q15283 850 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 DUSP28Q4G0W2 176 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 PREPLQ4J6C6 727 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SFRP4Q6FHJ7 346 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 ADGRG6Q86SQ4 1221 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 IQCF2Q8IXL9 164 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 MDGA1Q8NFP4 955 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZCCHC10Q8TBK6 192 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 CLEC4CQ8WTT0 213 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 MASTLQ96GX5 879 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 PLA2G12BQ9BX93 195 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 ABCG4Q9H172 646 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SIL1Q9H173 461 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 BEX4Q9NWD9 120 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 HCFC1R1Q9NWW0 138 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBK1Q9UHD2 729 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 STEAP1Q9UHE8 339 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SLC12A4Q9UP95 1085 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 TMEM5Q9Y2B1 443 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 ENTPD2Q9Y5L3 495 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 MROH6A6NGR9 719 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 MBD3L5A6NJ08 208 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 BOLA2-SMG1P6H3BVE0 249 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 H7C0S8 307 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 ZNF185O15231 689 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 GPANK1O95872 356 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 PDHA1P08559 390 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 TMEM225BP0DP42 221 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SKILP12757 684 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 PSMA3P25788 255 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 DPP6P42658 865 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 RCAN1P53805 252 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 RARSP54136 660 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 CDH15P55291 814 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 INHBEP58166 350 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 EIF4A1P60842 406 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SLC20A2Q08357 652 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 KIAA2012Q0VF49 1180 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SEMA3BQ13214 749 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 THOC5Q13769 683 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 KCNJ12Q14500 433 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 MED22Q15528 200 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 MLANAQ16655 118 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 METTL24Q5JXM2 366 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 C1QL3Q5VWW1 255 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 KLHL10Q6JEL2 608 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 RTL10Q7L3V2 364 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 CLNKQ7Z7G1 428 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 TEX11Q8IYF3 940 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SAMD14Q8IZD0 417 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 ADGRG5Q8IZF4 528 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 ARL6IP6Q8N6S5 226 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 ARL10Q8N8L6 244 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 RNFT2Q96EX2 444 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 CALML4Q96GE6 196 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 LRRC37BQ96QE4 947 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SERHL2Q9H4I8 314 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 DCAF16Q9NXF7 216 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 RNF114Q9Y508 228 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SNX5Q9Y5X3 404 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 SPATA31A3Q5VYP0 1347 aa4.41□□□□□ -1.7
CDC42BPA-207ENST00000441725 BAZ1AQ9NRL2 1556 aaPredicted RBP4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3DA0A087WVF3 549 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3IA0A087WXS9 549 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3EA0A087X179 549 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3KA0A087X1G2 549 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 PRAMEF33A0A0G2JMD5 474 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 FAM170AA1A519 330 aa4.4□□□□□ -1.7
CDC42BPA-207ENST00000441725 TBC1D3BA6NDS4 549 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms