RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 HS3ST4Q9Y661 456 aa28.89■■■□□ 2.22
CGREF1-207ENST00000440612 PER2O15055 1255 aa28.89■■■□□ 2.21
CGREF1-207ENST00000440612 LPXNO60711 386 aa28.89■■■□□ 2.21
CGREF1-207ENST00000440612 MYBL2P10244 700 aa28.89■■■□□ 2.21
CGREF1-207ENST00000440612 SLC2A3P11169 496 aa28.89■■■□□ 2.21
CGREF1-207ENST00000440612 PIK3R6Q5UE93 754 aa28.89■■■□□ 2.21
CGREF1-207ENST00000440612 FBXO38Q6PIJ6 1188 aa28.89■■■□□ 2.21
CGREF1-207ENST00000440612 ARNTL2Q8WYA1 636 aa28.89■■■□□ 2.21
CGREF1-207ENST00000440612 HBS1LQ9Y450 684 aaKnown RBP28.89■■■□□ 2.21
CGREF1-207ENST00000440612 ATG2AQ2TAZ0 1938 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 ANAPC1Q9H1A4 1944 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 MTCL1Q9Y4B5 1905 aaKnown RBP28.88■■■□□ 2.21
CGREF1-207ENST00000440612 RFPL2O75678 378 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 ECEL1O95672 775 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 ITGAVP06756 1048 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 ZNF135P52742 658 aaPredicted RBP28.88■■■□□ 2.21
CGREF1-207ENST00000440612 MLLT6P55198 1093 aaPredicted RBP28.88■■■□□ 2.21
CGREF1-207ENST00000440612 NRG1Q02297 640 aaPredicted RBP28.88■■■□□ 2.21
CGREF1-207ENST00000440612 DUPD1Q68J44 220 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 ZNF683Q8IZ20 524 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 P3H4Q92791 437 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 ERP44Q9BS26 406 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 PRDM16Q9HAZ2 1276 aa28.88■■■□□ 2.21
CGREF1-207ENST00000440612 MOCS2O96007 188 aaPredicted RBP28.87■■■□□ 2.21
CGREF1-207ENST00000440612 TUBBP07437 444 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 ZFXP17010 805 aaPredicted RBP28.87■■■□□ 2.21
CGREF1-207ENST00000440612 TNFRSF8P28908 595 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 HOXC13P31276 330 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 KCNQ1P51787 676 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 PPM1LQ5SGD2 360 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 CCNI2Q6ZMN8 369 aaPredicted RBP28.87■■■□□ 2.21
CGREF1-207ENST00000440612 C14orf80Q86SX3 495 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 TADA2BQ86TJ2 420 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 C1orf74Q96LT6 269 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 EPAS1Q99814 870 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 SIK2Q9H0K1 926 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 C10orf88Q9H8K7 445 aa28.87■■■□□ 2.21
CGREF1-207ENST00000440612 CCL16O15467 120 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 OLFM2O95897 454 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 ERCC2P18074 760 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 TPI1P60174 286 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 GDPD5Q8WTR4 605 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 SLC22A12Q96S37 553 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 DTLQ9NZJ0 730 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 HEY1Q9Y5J3 304 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 OBSL1O75147 1896 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 HMBSP08397 361 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 GABRR2P28476 465 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 CARSP49589 748 aaKnown RBP28.86■■■□□ 2.21
CGREF1-207ENST00000440612 KPNA1P52294 538 aaPredicted RBP28.86■■■□□ 2.21
CGREF1-207ENST00000440612 EIF3EP60228 445 aaKnown RBP28.86■■■□□ 2.21
CGREF1-207ENST00000440612 PAFAH1B3Q15102 231 aaKnown RBP28.86■■■□□ 2.21
CGREF1-207ENST00000440612 DDX42Q86XP3 938 aaKnown RBP eCLIP28.86■■■□□ 2.21
CGREF1-207ENST00000440612 TDHQ8IZJ6 230 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 ALLCQ8N6M5 410 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 GLIS1Q8NBF1 620 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 ZFRQ96KR1 1074 aaKnown RBP28.86■■■□□ 2.21
CGREF1-207ENST00000440612 OLFM3Q96PB7 478 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 TMEM121Q9BTD3 319 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 FEZ2Q9UHY8 353 aaPredicted RBP28.86■■■□□ 2.21
CGREF1-207ENST00000440612 HCFC2Q9Y5Z7 792 aa28.86■■■□□ 2.21
CGREF1-207ENST00000440612 MAP3K6O95382 1288 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 ECHS1P30084 290 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 HOXA9P31269 272 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 NR2C2P49116 596 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 EPHA5P54756 1037 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 PABPC1LQ4VXU2 614 aaKnown RBP28.85■■■□□ 2.21
CGREF1-207ENST00000440612 MS4A13Q5J8X5 152 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 IFT20Q8IY31 132 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 GRK7Q8WTQ7 553 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 BTN2A3PQ96KV6 586 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 PRMT1Q99873 361 aaKnown RBP28.85■■■□□ 2.21
CGREF1-207ENST00000440612 KLF16Q9BXK1 252 aaPredicted RBP28.85■■■□□ 2.21
CGREF1-207ENST00000440612 LMAN2LQ9H0V9 348 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 SLC28A3Q9HAS3 691 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 HCFC1R1Q9NWW0 138 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 ZNF148Q9UQR1 794 aa28.85■■■□□ 2.21
CGREF1-207ENST00000440612 MFSD11O43934 449 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 APOEP02649 317 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 RBP3P10745 1247 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 CCR2P41597 374 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 PTK6Q13882 451 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 BRD3Q15059 726 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 TXNDC8Q6A555 127 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 PRUNE1Q86TP1 453 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 RBM23Q86U06 439 aaKnown RBP28.84■■■□□ 2.21
CGREF1-207ENST00000440612 CCDC114Q96M63 670 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 CYP2S1Q96SQ9 504 aa28.84■■■□□ 2.21
CGREF1-207ENST00000440612 UTP11Q9Y3A2 253 aaKnown RBP28.84■■■□□ 2.21
CGREF1-207ENST00000440612 CCDC151A5D8V7 595 aa28.83■■■□□ 2.21
CGREF1-207ENST00000440612 DAPK3O43293 454 aa28.83■■■□□ 2.21
CGREF1-207ENST00000440612 IVDP26440 423 aa28.83■■■□□ 2.21
CGREF1-207ENST00000440612 EPHB2P29323 1055 aa28.83■■■□□ 2.21
CGREF1-207ENST00000440612 DRG2P55039 364 aaKnown RBP28.83■■■□□ 2.21
CGREF1-207ENST00000440612 GDF10P55107 478 aa28.83■■■□□ 2.21
CGREF1-207ENST00000440612 SYDE1Q6ZW31 735 aaPredicted RBP28.83■■■□□ 2.21
CGREF1-207ENST00000440612 B4GALNT4Q76KP1 1039 aa28.83■■■□□ 2.21
CGREF1-207ENST00000440612 NPWQ8N729 165 aa28.83■■■□□ 2.21
CGREF1-207ENST00000440612 WBP2Q969T9 261 aa28.83■■■□□ 2.21
CGREF1-207ENST00000440612 CORO1BQ9BR76 489 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms