RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CAVIN2O95810 425 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 SERPINC1P01008 464 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 NTSR1P30989 418 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 GBP1P32455 592 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 MATKP42679 507 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 WASP42768 502 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 RNASE9P60153 205 aaKnown RBP24.53■■□□□ 1.52
VARS-217ENST00000440048 MPP7Q5T2T1 576 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 FAM102AQ5T9C2 384 aaPredicted RBP24.53■■□□□ 1.52
VARS-217ENST00000440048 TRIM72Q6ZMU5 477 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 PRR23BQ6ZRT6 265 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 ANKS1BQ7Z6G8 1248 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 GAB3Q8WWW8 586 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 MYEOVQ96EZ4 313 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 PRICKLE1Q96MT3 831 aaPredicted RBP24.53■■□□□ 1.52
VARS-217ENST00000440048 PCDHB18PQ96TA0 734 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 HINFPQ9BQA5 517 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.53■■□□□ 1.52
VARS-217ENST00000440048 COX16Q9P0S2 106 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 SDK1Q7Z5N4 2213 aa24.53■■□□□ 1.52
VARS-217ENST00000440048 TPM4P67936 248 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 LPAL2Q16609 132 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 RNF43Q68DV7 783 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 ANO7Q6IWH7 933 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 RASSF3Q86WH2 238 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 CHPFQ8IZ52 775 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 ATP6V0D2Q8N8Y2 350 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 BTN2A3PQ96KV6 586 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 POLMQ9NP87 494 aaPredicted RBP24.52■■□□□ 1.52
VARS-217ENST00000440048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.52■■□□□ 1.52
VARS-217ENST00000440048 RAB23Q9ULC3 237 aa24.52■■□□□ 1.52
VARS-217ENST00000440048 A0A1W2PQC6 194 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 KCNU1A8MYU2 1149 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 GOLGA8SH3BPF8 625 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 RPP40O75818 363 aaKnown RBP24.51■■□□□ 1.51
VARS-217ENST00000440048 SLC2A3P11169 496 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 MMP8P22894 467 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 CCR1P32246 355 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 NME3Q13232 169 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 NR1I3Q14994 352 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 MS4A13Q5J8X5 152 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 OTUD1Q5VV17 481 aaPredicted RBP24.51■■□□□ 1.51
VARS-217ENST00000440048 MMS22LQ6ZRQ5 1243 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 CEP68Q76N32 757 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 HJURPQ8NCD3 748 aaPredicted RBP24.51■■□□□ 1.51
VARS-217ENST00000440048 MDGA1Q8NFP4 955 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 SLC30A5Q8TAD4 765 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 BAP1Q92560 729 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 RNF34Q969K3 372 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 NPY6RQ99463 290 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 RRN3Q9NYV6 651 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 STIM2Q9P246 746 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 SLC12A6Q9UHW9 1150 aa24.51■■□□□ 1.51
VARS-217ENST00000440048 M0QYT0 321 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 ALDH1A2O94788 518 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 UNGP13051 313 aaPredicted RBP24.5■■□□□ 1.51
VARS-217ENST00000440048 HOXB2P14652 356 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 FERP16591 822 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 HLA-FP30511 346 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 RPS24P62847 133 aaKnown RBP24.5■■□□□ 1.51
VARS-217ENST00000440048 FANCCQ00597 558 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 RAP1GAP2Q684P5 730 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 TMEM215Q68D42 235 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 SDE2Q6IQ49 451 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 GPR161Q8N6U8 529 aaKnown RBP24.5■■□□□ 1.51
VARS-217ENST00000440048 WFDC5Q8TCV5 224 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 ADAM33Q9BZ11 813 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 TPSD1Q9BZJ3 242 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 ELOVL2Q9NXB9 296 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 CACNA2D2Q9NY47 1150 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 CALCOCO1Q9P1Z2 691 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 NCDNQ9UBB6 729 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 MYO6Q9UM54 1294 aa24.5■■□□□ 1.51
VARS-217ENST00000440048 RALGAPA1Q6GYQ0 2036 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 A0A1W2PQF6 199 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 TCRBV21S2A2A0A5A6 115 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 GOLGA6L19H0YKK7 550 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 TFE3P19532 575 aaPredicted RBP24.49■■□□□ 1.51
VARS-217ENST00000440048 ABCB4P21439 1286 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 TACR2P21452 398 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 EIF4HQ15056 248 aaKnown RBP24.49■■□□□ 1.51
VARS-217ENST00000440048 CLEC16AQ2KHT3 1053 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 IRF2BP2Q7Z5L9 587 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 CHSY1Q86X52 802 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 LGI2Q8N0V4 545 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 CFAP52Q8N1V2 620 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 DCLK2Q8N568 766 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.49■■□□□ 1.51
VARS-217ENST00000440048 UCMAQ8WVF2 138 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 NT5C3BQ969T7 300 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 GABRG3Q99928 467 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 AGPAT1Q99943 283 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 C11orf70Q9BRQ4 267 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 ABCB8Q9NUT2 735 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 THAP10Q9P2Z0 257 aaPredicted RBP24.49■■□□□ 1.51
VARS-217ENST00000440048 TMEM59LQ9UK28 342 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 STAP1Q9ULZ2 295 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 DMXL1Q9Y485 3027 aa24.49■■□□□ 1.51
VARS-217ENST00000440048 TYW5A2RUC4 315 aaKnown RBP24.48■■□□□ 1.51
VARS-217ENST00000440048 WASH3PC4AMC7 463 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms