RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 KRTAP4-8Q9BYQ9 185 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 TRIM5Q9C035 493 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 NACA2Q9H009 215 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 EBF3Q9H4W6 596 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 HAUS4Q9H6D7 363 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 RUBCNLQ9H714 662 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 C11orf16Q9NQ32 467 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 HPS4Q9NQG7 708 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 HEBP1Q9NRV9 189 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 OLA1Q9NTK5 396 aaKnown RBP7.8□□□□□ -1.16
COPS3-203ENST00000439936 DUS2Q9NX74 493 aaKnown RBP7.8□□□□□ -1.16
COPS3-203ENST00000439936 GTSE1Q9NYZ3 720 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 MARCH2Q9P0N8 246 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 SFMBT1Q9UHJ3 866 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 RASAL2Q9UJF2 1139 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 FBXL21Q9UKT6 434 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 ZNF232Q9UNY5 417 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 NAALADL1Q9UQQ1 740 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 LUC7L2Q9Y383 392 aaKnown RBP7.8□□□□□ -1.16
COPS3-203ENST00000439936 CEP83Q9Y592 693 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.8□□□□□ -1.16
COPS3-203ENST00000439936 WNT6Q9Y6F9 365 aa7.8□□□□□ -1.16
COPS3-203ENST00000439936 BDP1A6H8Y1 2624 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 ITIH6Q6UXX5 1313 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 SLC12A8A0AV02 714 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 FAM86C2PA6NEL3 165 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 OTOL1A6NHN0 477 aaPredicted RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 SHISA7A6NL88 538 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 SART1O43290 800 aaKnown RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 GREM1O60565 184 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 STC2O76061 302 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 LSM8O95777 96 aaKnown RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 KLKB1P03952 638 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 GYPCP04921 128 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 HMBSP08397 361 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 IRF1P10914 325 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 NCAM1P13591 858 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 MX2P20592 715 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 CD72P21854 359 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 CASP14P31944 242 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 PRKCIP41743 596 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 IFNAR2P48551 515 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 STARD6P59095 220 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 KLHL30Q0D2K2 578 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 PTP4A2Q12974 167 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 ASIC2Q16515 512 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 CLEC16AQ2KHT3 1053 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 ITPRIPL2Q3MIP1 535 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 EFHC1Q5JVL4 640 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 HGSNATQ68CP4 663 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 SPECC1LQ69YQ0 1117 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 MSANTD2Q6P1R3 559 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 RHBDF2Q6PJF5 856 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 TRIM72Q6ZMU5 477 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 FAM183BPQ6ZVS7 135 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 RSRC2Q7L4I2 434 aaKnown RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 BEND5Q7L4P6 421 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 ZNF571Q7Z3V5 609 aaPredicted RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 TADA2BQ86TJ2 420 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 XYLT1Q86Y38 959 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 FMNL3Q8IVF7 1028 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 VSTM4Q8IW00 320 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 DEFB106AQ8N104 65 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 KIAA1958Q8N8K9 716 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 ZNF397Q8NF99 534 aaPredicted RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 OLIG1Q8TAK6 271 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 OSCP1Q8WVF1 389 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 SYN2Q92777 582 aaPredicted RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 DNASE1L2Q92874 299 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 IQCDQ96DY2 449 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 CDK5RAP1Q96SZ6 601 aaKnown RBP7.79□□□□□ -1.16
COPS3-203ENST00000439936 TBC1D14Q9P2M4 693 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 STRIP2Q9ULQ0 834 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 SH3BP1Q9Y3L3 701 aa7.79□□□□□ -1.16
COPS3-203ENST00000439936 MIA3Q5JRA6 1907 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 SLC9A3R1O14745 358 aaPredicted RBP7.78□□□□□ -1.16
COPS3-203ENST00000439936 CAPN9O14815 690 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 PI15O43692 258 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 GRAP2O75791 330 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 GLI1P08151 1106 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 GLULP15104 373 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 MMP8P22894 467 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 SOX9P48436 509 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 KPNA1P52294 538 aaPredicted RBP7.78□□□□□ -1.16
COPS3-203ENST00000439936 MLLT6P55198 1093 aaPredicted RBP7.78□□□□□ -1.16
COPS3-203ENST00000439936 RNASE9P60153 205 aaKnown RBP7.78□□□□□ -1.16
COPS3-203ENST00000439936 PITX1P78337 314 aaPredicted RBP7.78□□□□□ -1.16
COPS3-203ENST00000439936 PRKCQQ04759 706 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 PDGFRLQ15198 375 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 TRIP4Q15650 581 aaPredicted RBP7.78□□□□□ -1.16
COPS3-203ENST00000439936 MLF2Q15773 248 aaPredicted RBP7.78□□□□□ -1.16
COPS3-203ENST00000439936 TMEM31Q5JXX7 168 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 ACAD10Q6JQN1 1059 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 OLFML1Q6UWY5 402 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
COPS3-203ENST00000439936 SLC26A9Q7LBE3 791 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 PHLDB2Q86SQ0 1253 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 ZDHHC17Q8IUH5 632 aa7.78□□□□□ -1.16
COPS3-203ENST00000439936 BBS7Q8IWZ6 715 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms