RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SCAMP5Q8TAC9 235 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 LRRN4Q8WUT4 740 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 CHMP6Q96FZ7 201 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 C8orf48Q96LL4 319 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 CASD1Q96PB1 797 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 ZNF317Q96PQ6 595 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-202ENST00000439724 LGMNQ99538 433 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 EPAS1Q99814 870 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 BRD8Q9H0E9 1235 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 TKTL2Q9H0I9 626 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 OSBPL2Q9H1P3 480 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 SMOC2Q9H3U7 446 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 PRDM12Q9H4Q4 367 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 XAB2Q9HCS7 855 aaKnown RBP12.15□□□□□ -0.46
SMAD3-202ENST00000439724 PAK6Q9NQU5 681 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-202ENST00000439724 EIF2B3Q9NR50 452 aaKnown RBP12.15□□□□□ -0.46
SMAD3-202ENST00000439724 TMEM51Q9NW97 253 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 ARHGEF38Q9NXL2 777 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 GGA2Q9UJY4 613 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 TRIM17Q9Y577 477 aa12.15□□□□□ -0.46
SMAD3-202ENST00000439724 TTC3P53804 2025 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 OR6C75A6NL08 312 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 RNF103O00237 685 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 HOXA2O43364 376 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 TADA2AO75478 443 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 OR4Q2P0C623 313 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 DRD4P21917 467 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 MAGEA11P43364 429 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 MRPL58Q14197 206 aaKnown RBP12.14□□□□□ -0.47
SMAD3-202ENST00000439724 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
SMAD3-202ENST00000439724 BTBD8Q5XKL5 378 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 ZNF534Q76KX8 674 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 AGGF1Q8N302 714 aaeCLIP12.14□□□□□ -0.47
SMAD3-202ENST00000439724 CCDC33Q8N5R6 958 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 P2RY11Q96G91 374 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 CYTH2Q99418 400 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 ADAM28Q9UKQ2 775 aa12.14□□□□□ -0.47
SMAD3-202ENST00000439724 ATXN2Q99700 1313 aaKnown RBP12.13□□□□□ -0.47
SMAD3-202ENST00000439724 TCRBV9S1A1TA0A576 114 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 FOXO6A8MYZ6 492 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 TRIM66O15016 1216 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 PRPF4O43172 522 aaKnown RBP eCLIP12.13□□□□□ -0.471e-11■□□□□ 11.3
SMAD3-202ENST00000439724 LRIG2O94898 1065 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 MLNP12872 115 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 STX2P32856 288 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 HTR7P34969 479 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 SERPINB6P35237 376 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 SARNPP82979 210 aaKnown RBP12.13□□□□□ -0.47
SMAD3-202ENST00000439724 PPIDQ08752 370 aaKnown RBP12.13□□□□□ -0.47
SMAD3-202ENST00000439724 AP1B1Q10567 949 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 WASHC5Q12768 1159 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 MPP2Q14168 576 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 EFTUD2Q15029 972 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■■■■□ 23
SMAD3-202ENST00000439724 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
SMAD3-202ENST00000439724 ZNF280DQ6N043 979 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 SCN4BQ8IWT1 228 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 CRIPAKQ8N1N5 446 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 HDAC11Q96DB2 347 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 SGSM3Q96HU1 749 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 PRMT1Q99873 361 aaKnown RBP12.13□□□□□ -0.47
SMAD3-202ENST00000439724 TMEM175Q9BSA9 504 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 MRPL9Q9BYD2 267 aaKnown RBP12.13□□□□□ -0.47
SMAD3-202ENST00000439724 TRABDQ9H4I3 376 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 SSU72Q9NP77 194 aaKnown RBP12.13□□□□□ -0.47
SMAD3-202ENST00000439724 KCNK9Q9NPC2 374 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 MARCH5Q9NX47 278 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 ABI2Q9NYB9 513 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-202ENST00000439724 IGSF9Q9P2J2 1179 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 OR12D3Q9UGF7 316 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 OGDHLQ9ULD0 1010 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 SCML2Q9UQR0 700 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 PCDHB5Q9Y5E4 795 aa12.13□□□□□ -0.47
SMAD3-202ENST00000439724 SCN5AQ14524 2016 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 FAM47DPA6NHR8 397 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 TRDMT1O14717 391 aaKnown RBP12.12□□□□□ -0.47
SMAD3-202ENST00000439724 MTSS1O43312 755 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 AVILO75366 819 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 C1QAP02745 245 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 KRT15P19012 456 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 MX2P20592 715 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 FGFR3P22607 806 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 HOXC13P31276 330 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 MSH2P43246 934 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 SLC11A1P49279 550 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 GALNT2Q10471 571 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 ELAVL2Q12926 359 aaKnown RBP12.12□□□□□ -0.47
SMAD3-202ENST00000439724 MTM1Q13496 603 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 QPCTQ16769 361 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 PARP6Q2NL67 630 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 CTXN3Q4LDR2 81 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 SYCP2LQ5T4T6 812 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 FAM171A1Q5VUB5 890 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 MSANTD2Q6P1R3 559 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 DENND5BQ6ZUT9 1274 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 NPAS4Q8IUM7 802 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 NUP93Q8N1F7 819 aa12.12□□□□□ -0.47
SMAD3-202ENST00000439724 NPWQ8N729 165 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms