RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CTSAP10619 480 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 UQCRC1P31930 480 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 THBS4P35443 961 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 ME1P48163 572 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 THBS3P49746 956 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 CFHR1Q03591 330 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 KCNB1Q14721 858 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 INSCQ1MX18 579 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 CACHD1Q5VU97 1274 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 VSTM1Q6UX27 236 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 B3GNT9Q6UX72 402 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZDHHC24Q6UX98 284 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 MEPCEQ7L2J0 689 aaKnown RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 ANKRD13BQ86YJ7 626 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 MAML1Q92585 1016 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZBTB45Q96K62 511 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 AIFM3Q96NN9 605 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 ACO2Q99798 780 aaKnown RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 HTATIP2Q9BUP3 242 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 RHOBTB2Q9BYZ6 727 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZNF518BQ9C0D4 1074 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 A1CFQ9NQ94 594 aaKnown RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 GAR1Q9NY12 217 aaKnown RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 WWOXQ9NZC7 414 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 DNMT3BQ9UBC3 853 aaKnown RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 MAFFQ9ULX9 164 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 WDR87Q6ZQQ6 2873 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 GVINP1Q7Z2Y8 2422 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 SPG11Q96JI7 2443 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 CDH23Q9H251 3354 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 COL18A1P39060 1754 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 LRPPRCP42704 1394 aaKnown RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 KIAA1551Q9HCM1 1747 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 ACEP12821 1306 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 BRCA1P38398 1863 aaKnown RBP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 DNAH14Q0VDD8 3507 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 H3BNX3 289 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 KIF3BO15066 747 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 CD3EAPO15446 510 aaKnown RBP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 IGSF3O75054 1194 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 CNOT3O75175 753 aaKnown RBP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 CAMTA2O94983 1202 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 PSG1P11464 419 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 ATF7P17544 494 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 AGFG1P52594 562 aaKnown RBP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 RPS13P62277 151 aaKnown RBP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 TIAL1Q01085 375 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 CFHR3Q02985 330 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 SLC4A8Q2Y0W8 1093 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 ANO6Q4KMQ2 910 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 KIAA1161Q6NSJ0 714 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 C9orf47Q6ZRZ4 202 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 KCTD20Q7Z5Y7 419 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 PIM3Q86V86 326 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 COL23A1Q86Y22 540 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 TDHQ8IZJ6 230 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZNF548Q8NEK5 533 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 OR56A3Q8NH54 315 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 IL31RAQ8NI17 732 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 SLC35G2Q8TBE7 412 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 SPSB4Q96A44 273 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 LRGUKQ96M69 825 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 TAAR9Q96RI9 348 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 ATP6V0A4Q9HBG4 840 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 TRIM36Q9NQ86 728 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 HS3ST3B1Q9Y662 390 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 SQORQ9Y6N5 450 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 PLEKHG1Q9ULL1 1385 aa3.5□□□□□ -1.85
HMGB1P18-201ENST00000438801 COL4A5P29400 1685 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 AKAP12Q02952 1782 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 LOC102723971A0A1B0GUV8 181 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 FAM90A8PA6NJQ4 464 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 H7C4K7 107 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 CLIC1O00299 241 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 EXOC5O00471 708 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 TBX3O15119 743 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 CCP110O43303 1012 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 MARCH6O60337 910 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 ALDH1L1O75891 902 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 CRYABP02511 175 aaKnown RBP3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 FAM90A13PP0C7W8 464 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 FAM90A24PP0C7X0 464 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 SLC7A1P30825 629 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 HTR6P50406 440 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 NANOS2P60321 138 aaKnown RBP3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 DMWDQ09019 674 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 PIN1Q13526 163 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 MFSD13AQ14CX5 517 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 PTPROQ16827 1216 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 CC2D1BQ5T0F9 858 aaKnown RBP3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 MICU3Q86XE3 530 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 CHPFQ8IZ52 775 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 ARFGAP1Q8N6T3 406 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 JPH3Q8WXH2 748 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 PPM1EQ8WY54 764 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 EDC3Q96F86 508 aaKnown RBP3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 WDYHV1Q96HA8 205 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms