RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GPR161Q8N6U8 529 aaKnown RBP25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 ATP6V0D2Q8N8Y2 350 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 HJURPQ8NCD3 748 aaPredicted RBP25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 MDGA1Q8NFP4 955 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 BCCIPQ9P287 314 aaKnown RBP eCLIP25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 HCN2Q9UL51 889 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 TIMM44O43615 452 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 CAVIN2O95810 425 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 SLC6A4P31645 630 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 CCR1P32246 355 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 NOMO3P69849 1222 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 SKOR2Q2VWA4 1001 aaPredicted RBP25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 TRIM72Q6ZMU5 477 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 CCDC117Q8IWD4 279 aaPredicted RBP25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 WFIKKN2Q8TEU8 576 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 GABRG3Q99928 467 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 RTN4Q9NQC3 1192 aaKnown RBP25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 TMEM51Q9NW97 253 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 ELOVL2Q9NXB9 296 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 CLEC4EQ9ULY5 219 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 STAP1Q9ULZ2 295 aa25.66■■□□□ 1.7
RAPGEF1-206ENST00000438647 GOLGA6L7A0A1B0GV03 622 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 TCRBV21S2A2A0A5A6 115 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 TBL1XO60907 577 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 RETP07949 1114 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 CCDC172P0C7W6 258 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 ABCB4P21439 1286 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 MATKP42679 507 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 PITX1P78337 314 aaPredicted RBP25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 ARID5AQ03989 594 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 EIF4EBP2Q13542 120 aaPredicted RBP25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 IQCB1Q15051 598 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 FAM102AQ5T9C2 384 aaPredicted RBP25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 NAA35Q5VZE5 725 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 NADSYN1Q6IA69 706 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 SLC20A1Q8WUM9 679 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 RNF34Q969K3 372 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 TPSD1Q9BZJ3 242 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 CIPCQ9C0C6 399 aa25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.65■■□□□ 1.7
RAPGEF1-206ENST00000438647 SYNJ2BP-COX16A0A087WUM0 186 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 HLA-FP30511 346 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 WASP42768 502 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 SGSHP51688 502 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 FMO1Q01740 532 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 MS4A13Q5J8X5 152 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 RNF43Q68DV7 783 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 XYLT1Q86Y38 959 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 PGBD3Q8N328 593 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 DCLK2Q8N568 766 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 FAM160A2Q8N612 972 aaPredicted RBP25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 HMGB4Q8WW32 186 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 CPA5Q8WXQ8 436 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 LOXL4Q96JB6 756 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 ACOX2Q99424 681 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 NUCKS1Q9H1E3 243 aaKnown RBP25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 CACNA2D2Q9NY47 1150 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 COX16Q9P0S2 106 aa25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 THAP10Q9P2Z0 257 aaPredicted RBP25.64■■□□□ 1.7
RAPGEF1-206ENST00000438647 KCNU1A8MYU2 1149 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 TEX33O43247 280 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 CYP1A1P04798 512 aaPredicted RBP25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 RNASE9P60153 205 aaKnown RBP25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 BYSLQ13895 437 aaKnown RBP25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 STARD3Q14849 445 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 ELF2Q15723 593 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 CHSY1Q86X52 802 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 MFN1Q8IWA4 741 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 AHI1Q8N157 1196 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 ZC3H10Q96K80 434 aaKnown RBP25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 SPACA7Q96KW9 195 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 PRICKLE1Q96MT3 831 aaPredicted RBP25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 ABCB8Q9NUT2 735 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 STIM2Q9P246 746 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 GGA2Q9UJY4 613 aa25.63■■□□□ 1.69
RAPGEF1-206ENST00000438647 A0A1W2PQF6 199 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 M0QYT0 321 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 LRP3O75074 770 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 SERPINC1P01008 464 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 PABPC1P11940 636 aaKnown RBP25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 CHRNB2P17787 502 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 NME3Q13232 169 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 KBTBD6Q86V97 674 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 XPO7Q9UIA9 1087 aaKnown RBP25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 MYO6Q9UM54 1294 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 PAXBP1Q9Y5B6 917 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 STON1Q9Y6Q2 735 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 ZNF292O60281 2723 aa25.62■■□□□ 1.69
RAPGEF1-206ENST00000438647 F5H5T6 163 aa25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 RHOBTB1O94844 696 aa25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 FERP16591 822 aa25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 TACR2P21452 398 aa25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 RPS24P62847 133 aaKnown RBP25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 CDH18Q13634 790 aa25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 RAP1GAP2Q684P5 730 aa25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 SND1Q7KZF4 910 aaKnown RBP eCLIP25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 CHST9Q7L1S5 443 aa25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 KIAA0907Q7Z7F0 614 aaPredicted RBP25.61■■□□□ 1.69
RAPGEF1-206ENST00000438647 LGI2Q8N0V4 545 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms