RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 PCDHAC1Q9H158 963 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 TMEM216Q9P0N5 145 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 TSPAN16Q9UKR8 245 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 NUMBLQ9Y6R0 609 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 PRRC2BQ5JSZ5 2229 aaKnown RBP11.28□□□□□ -0.6
CHEK1-204ENST00000438015 ABLIM1O14639 778 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 PAPSS1O43252 624 aaPredicted RBP11.28□□□□□ -0.6
CHEK1-204ENST00000438015 PMPCBO75439 489 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 GCAP28676 217 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 CAP2P40123 477 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 YWHAHQ04917 246 aaPredicted RBP11.28□□□□□ -0.6
CHEK1-204ENST00000438015 NSUN2Q08J23 767 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHEK1-204ENST00000438015 TRAF2Q12933 501 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 ATF7IP2Q5U623 682 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 ZC3H3Q8IXZ2 948 aaKnown RBP11.28□□□□□ -0.6
CHEK1-204ENST00000438015 ELMO2Q96JJ3 720 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
CHEK1-204ENST00000438015 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 B4GALT5O43286 388 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 ZC3H11AO75152 810 aaKnown RBP eCLIP11.27□□□□□ -0.6
CHEK1-204ENST00000438015 MTA2O94776 668 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 ME2P23368 584 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 PTGER2P43116 358 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 PCYT1AP49585 367 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 CNTN2Q02246 1040 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 KLF1Q13351 362 aaPredicted RBP11.27□□□□□ -0.6
CHEK1-204ENST00000438015 POU6F1Q14863 301 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 GPR107Q5VW38 600 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 SCARA3Q6AZY7 606 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 PHF13Q86YI8 300 aaPredicted RBP11.27□□□□□ -0.6
CHEK1-204ENST00000438015 FAM47BQ8NA70 645 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 OR52K1Q8NGK4 314 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 PDCD6IPQ8WUM4 868 aaKnown RBP11.27□□□□□ -0.6
CHEK1-204ENST00000438015 NDRG1Q92597 394 aaKnown RBP11.27□□□□□ -0.6
CHEK1-204ENST00000438015 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.6
CHEK1-204ENST00000438015 CDHR1Q96JP9 859 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 APBA2Q99767 749 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 CNPY3Q9BT09 278 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 NOL11Q9H8H0 719 aaKnown RBP11.27□□□□□ -0.6
CHEK1-204ENST00000438015 PXMP2Q9NR77 195 aa11.27□□□□□ -0.6
CHEK1-204ENST00000438015 TTC36A6NLP5 189 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 TCEA3O75764 348 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 MICAL2O94851 1124 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 NDST1P52848 882 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 SNX16P57768 344 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 ABCE1P61221 599 aaKnown RBP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 ITGADQ13349 1161 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 GK3PQ14409 553 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 SLC39A4Q6P5W5 647 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 KLHDC10Q6PID8 442 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 JADE3Q92613 823 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 SYT11Q9BT88 431 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 ZNF180Q9UJW8 692 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 N4BP2Q86UW6 1770 aaPredicted RBP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 MAGEC1O60732 1142 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 TRMUO75648 421 aaKnown RBP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 CKMT2P17540 419 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 EIF2B2P49770 351 aaKnown RBP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 RTKN2Q8IZC4 609 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 FBXW8Q8N3Y1 598 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 DRAXINQ8NBI3 349 aaPredicted RBP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 DDHD1Q8NEL9 900 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 TFB1MQ8WVM0 346 aaKnown RBP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 ATP6V1E2Q96A05 226 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 PTCD3Q96EY7 689 aaKnown RBP11.27□□□□□ -0.61
CHEK1-204ENST00000438015 VCPIP1Q96JH7 1222 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 KLK14Q9P0G3 267 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 AP4E1Q9UPM8 1137 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 RIPK3Q9Y572 518 aa11.27□□□□□ -0.61
CHEK1-204ENST00000438015 E2F6O75461 281 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 TIPRLO75663 272 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 SUPT7LO94864 414 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 OATP04181 439 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 ERBB2P04626 1255 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 CHRNGP07510 517 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 PSMB4P28070 264 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 GRIA3P42263 894 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 SULT1E1P49888 294 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 KRT72Q14CN4 511 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 PLCL1Q15111 1095 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 ANKRD23Q86SG2 305 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 CLEC4FQ8N1N0 589 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 NKD2Q969F2 451 aaPredicted RBP11.26□□□□□ -0.61
CHEK1-204ENST00000438015 SKA1Q96BD8 255 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 CCDC97Q96F63 343 aaPredicted RBP11.26□□□□□ -0.61
CHEK1-204ENST00000438015 MFSD14AQ96MC6 490 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 FSD1LQ9BXM9 530 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 MAGEB5Q9BZ81 275 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 DCDC2Q9UHG0 476 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 BOLA2-SMG1P6H3BVE0 249 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 VNN1O95497 513 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 SPATA31D3P0C874 917 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 XRCC1P18887 633 aaPredicted RBP11.26□□□□□ -0.61
CHEK1-204ENST00000438015 KLF10Q13118 480 aa11.26□□□□□ -0.61
CHEK1-204ENST00000438015 CSHL1Q14406 222 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms