RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TPI1P60174 286 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 ANKRD20A2Q5SQ80 823 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 ANKRD20A1Q5TYW2 823 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 ANKRD20A3Q5VUR7 823 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 DCP1BQ8IZD4 617 aaKnown RBP26.51■■□□□ 1.83
CPNE1-216ENST00000437340 LRRN4Q8WUT4 740 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 SGSM3Q96HU1 749 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 PAFAH2Q99487 392 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 LGMNQ99538 433 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 TRABDQ9H4I3 376 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 XAB2Q9HCS7 855 aaKnown RBP26.51■■□□□ 1.83
CPNE1-216ENST00000437340 ANLNQ9NQW6 1124 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 SMG5Q9UPR3 1016 aaKnown RBP26.51■■□□□ 1.83
CPNE1-216ENST00000437340 RRP15Q9Y3B9 282 aaKnown RBP26.51■■□□□ 1.83
CPNE1-216ENST00000437340 FAM47DPA6NHR8 397 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 NCAM2O15394 837 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 ERCC2P18074 760 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 GJA8P48165 433 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 BFSP2Q13515 415 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 MPP2Q14168 576 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 GKAP1Q5VSY0 366 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-216ENST00000437340 FAM193BQ96PV7 902 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-216ENST00000437340 EPAS1Q99814 870 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 BRD8Q9H0E9 1235 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 ZCWPW1Q9H0M4 648 aa26.51■■□□□ 1.83
CPNE1-216ENST00000437340 SSU72Q9NP77 194 aaKnown RBP26.51■■□□□ 1.83
CPNE1-216ENST00000437340 PTPRDP23468 1912 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 SCN5AQ14524 2016 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 FAM72CH0Y354 149 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 I6L893 689 aaPredicted RBP26.5■■□□□ 1.83
CPNE1-216ENST00000437340 STX2P32856 288 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 CYP2C18P33260 490 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 MSH2P43246 934 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 OR1G1P47890 313 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 SARNPP82979 210 aaKnown RBP26.5■■□□□ 1.83
CPNE1-216ENST00000437340 QPCTQ16769 361 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 FAM72AQ5TYM5 149 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 FAM72DQ6L9T8 149 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 TAC4Q86UU9 113 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 FAM72BQ86X60 149 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 CKAP2Q8WWK9 683 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 P2RY11Q96G91 374 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 SMC6Q96SB8 1091 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 ABCC13Q9NSE7 274 aa26.5■■□□□ 1.83
CPNE1-216ENST00000437340 TCRBV9S1A1TA0A576 114 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 TNFRSF10BO14763 440 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 SYN3O14994 580 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 AVILO75366 819 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 IGLV3-25P01717 112 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 SLC5A3P53794 718 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 MTM1Q13496 603 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 SYCP2LQ5T4T6 812 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 CCDC33Q8N5R6 958 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 ANKRD42Q8N9B4 389 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 DQX1Q8TE96 717 aaKnown RBP26.49■■□□□ 1.83
CPNE1-216ENST00000437340 FUBP3Q96I24 572 aaKnown RBP eCLIP26.49■■□□□ 1.83
CPNE1-216ENST00000437340 TKTL2Q9H0I9 626 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 PRDM12Q9H4Q4 367 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 EIF2B3Q9NR50 452 aaKnown RBP26.49■■□□□ 1.83
CPNE1-216ENST00000437340 TMEM51Q9NW97 253 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 FAM169AQ9Y6X4 670 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 NLRC5Q86WI3 1866 aa26.49■■□□□ 1.83
CPNE1-216ENST00000437340 TRDMT1O14717 391 aaKnown RBP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 MLNP12872 115 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 GRIK1P39086 918 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 IFNAR2P48551 515 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 YWHAGP61981 247 aaKnown RBP eCLIP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 AP1B1Q10567 949 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 EIF4EBP2Q13542 120 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 NFE2Q16621 373 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 ZNF534Q76KX8 674 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 YTHDF3Q7Z739 585 aaKnown RBP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 AGGF1Q8N302 714 aaeCLIP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 MGARPQ8TDB4 240 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 SEC16BQ96JE7 1060 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 NSRP1Q9H0G5 558 aaKnown RBP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 KIAA0100Q14667 2235 aaKnown RBP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 PATJQ8NI35 1801 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 RNF103O00237 685 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 EFTUD2Q15029 972 aaKnown RBP eCLIP26.48■■□□□ 1.836e-8■■■■□ 26.4
CPNE1-216ENST00000437340 LRRC14Q15048 493 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 ANKRD33Q7Z3H0 272 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 LRRC34Q8IZ02 419 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 CACNA2D3Q8IZS8 1091 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 SCAMP5Q8TAC9 235 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 DCAKDQ8WVC6 231 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 OSBPL2Q9H1P3 480 aa26.48■■□□□ 1.83
CPNE1-216ENST00000437340 ZC3H7BQ9UGR2 993 aaKnown RBP26.48■■□□□ 1.83
CPNE1-216ENST00000437340 TRIM60Q495X7 471 aa26.47■■□□□ 1.83
CPNE1-216ENST00000437340 SLC39A12Q504Y0 691 aa26.47■■□□□ 1.83
CPNE1-216ENST00000437340 COLGALT1Q8NBJ5 622 aa26.47■■□□□ 1.83
CPNE1-216ENST00000437340 CCNYQ8ND76 341 aa26.47■■□□□ 1.83
CPNE1-216ENST00000437340 SLC44A1Q8WWI5 657 aa26.47■■□□□ 1.83
CPNE1-216ENST00000437340 OR12D3Q9UGF7 316 aa26.47■■□□□ 1.83
CPNE1-216ENST00000437340 ENPP3O14638 875 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 TADA2AO75478 443 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 MX2P20592 715 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 SERPINB6P35237 376 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 PARP6Q2NL67 630 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 PLEKHG4Q58EX7 1191 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms