RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 MGEA5O60502 916 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 MT-ND5P03915 603 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 ENO1P06733 434 aaKnown RBP3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 PDGFRBP09619 1106 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 U2AF1L5P0DN76 240 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 SLC8A1P32418 973 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 RFX2P48378 723 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 ZNF84P51523 738 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 U2AF1Q01081 240 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 DMWDQ09019 674 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 ANXA2RQ3ZCQ2 193 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 CXorf57Q6NSI4 855 aaKnown RBP3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 TRILQ7L0X0 811 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 SRGAP1Q7Z6B7 1085 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 RBM23Q86U06 439 aaKnown RBP3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 ZNF329Q86UD4 541 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 ABHD5Q8WTS1 349 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 ASB12Q8WXK4 309 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 SNX22Q96L94 193 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 SLITRK1Q96PX8 696 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 ELOVL1Q9BW60 279 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 SEZ6LQ9BYH1 1024 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 METTL14Q9HCE5 456 aaKnown RBP3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 PLSCR4Q9NRQ2 329 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 ZIM2Q9NZV7 527 aa3.73□□□□□ -1.81
HMGB1P31-201ENST00000437242 RB1CC1Q8TDY2 1594 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 RHODO00212 210 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 PODXLO00592 558 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 MDM4O15151 490 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 LINC01565O15544 149 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 SGPL1O95470 568 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 IFNA2P01563 188 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 MYF5P13349 255 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 KRT10P13645 584 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 MMP8P22894 467 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 DSCR9P59020 149 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 ELF2Q15723 593 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 IZUMO4Q1ZYL8 232 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 INO80DQ53TQ3 878 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 RNF220Q5VTB9 566 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 PPP4R4Q6NUP7 873 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 KYAT3Q6YP21 454 aaKnown RBP3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 FAM47BQ8NA70 645 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 OR52L2PQ8NGH6 319 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 STAG1Q8WVM7 1258 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 PMM1Q92871 262 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 PHF21BQ96EK2 531 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 MSLNLQ96KJ4 702 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 WDR24Q96S15 920 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 C6orf106Q9H6K1 298 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 SIRT3Q9NTG7 399 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 LAMP3Q9UQV4 416 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 PCDHGB1Q9Y5G3 927 aa3.72□□□□□ -1.81
HMGB1P31-201ENST00000437242 GRID2O43424 1007 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 CCNT2O60583 730 aaKnown RBP3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 CBFA2T3O75081 653 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 ZNF432O94892 652 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 HOXC6P09630 235 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 CPA1P15085 419 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 STAT6P42226 847 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 EPHB1P54762 984 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 ROR2Q01974 943 aaKnown RBP3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 FAM90A2PQ658T7 463 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 ABLIM2Q6H8Q1 611 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 ZNF474Q6S9Z5 364 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 CCDC149Q6ZUS6 474 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 RNF44Q7L0R7 432 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 C7orf57Q8NEG2 295 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 WFIKKN2Q8TEU8 576 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 INPP5DQ92835 1189 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 CLMNQ96JQ2 1002 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 TM6SF1Q9BZW5 370 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 DCLK3Q9C098 648 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 CDCP1Q9H5V8 836 aa3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 ERRFI1Q9UJM3 462 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P31-201ENST00000437242 A0A087WYN8 130 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 A6NNZ2 444 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 IL18RAPO95256 599 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 WNT1P04628 370 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 ANXA2P07355 339 aaKnown RBP3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 ATICP31939 592 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 AGTR2P50052 363 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 SEMA3BQ13214 749 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 PLEKHG6Q3KR16 790 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 MINDY4Q4G0A6 757 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 ARHGAP29Q52LW3 1261 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 TMEM196Q5HYL7 178 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 PRAMEF19Q5SWL8 479 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 ASPHD1Q5U4P2 390 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 HMBOX1Q6NT76 420 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 DARS2Q6PI48 645 aaKnown RBP3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 PARM1Q6UWI2 310 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 RTL10Q7L3V2 364 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 LAS2Q8IYD9 372 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 EIF3CQ99613 913 aaKnown RBP3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 RMI1Q9H9A7 625 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 AS3MTQ9HBK9 375 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 ZBTB26Q9HCK0 441 aa3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 KRCC1Q9NPI7 259 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P31-201ENST00000437242 TMOD4Q9NZQ9 345 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms