RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NEDD8-MDP1E9PL57 170 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 USP12O75317 370 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 FSBPO95073 299 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 TNNC2P02585 160 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 PRR29P0C7W0 189 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 DLATP10515 647 aaKnown RBP10.96□□□□□ -0.65
CPNE1-214ENST00000435747 CD27P26842 260 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 PCSK1P29120 753 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 CASP4P49662 377 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 NDUFA8P51970 172 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 USP46P62068 366 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 KRT85P78386 507 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 DPYDQ12882 1025 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 ZSCAN23Q3MJ62 389 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 TDRD10Q5VZ19 366 aaKnown RBP10.96□□□□□ -0.65
CPNE1-214ENST00000435747 HS2ST1Q7LGA3 356 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 BBS7Q8IWZ6 715 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 CEP57L1Q8IYX8 460 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 NOC3LQ8WTT2 800 aaKnown RBP10.96□□□□□ -0.65
CPNE1-214ENST00000435747 SKA1Q96BD8 255 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 CCDC127Q96BQ5 260 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 BIRC7Q96CA5 298 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 SPATA32Q96LK8 384 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 SYT15Q9BQS2 421 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 USP25Q9UHP3 1055 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 CDH9Q9ULB4 789 aa10.96□□□□□ -0.65
CPNE1-214ENST00000435747 LRRIQ3A6PVS8 624 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-214ENST00000435747 PDXKO00764 312 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 VILLO15195 856 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 CACNG3O60359 315 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 RHOBTB3O94955 611 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 VNN1O95497 513 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 C4BPAP04003 597 aaKnown RBP10.95□□□□□ -0.66
CPNE1-214ENST00000435747 TYRP14679 529 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 TNNI1P19237 187 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 ACP1P24666 158 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 ANXA13P27216 316 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 ACSL1P33121 698 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 DGKGP49619 791 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 CACNA2D1P54289 1103 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 BCAT1P54687 386 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 INHBCP55103 352 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 MYL6P60660 151 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 PSMC1P62191 440 aaKnown RBP10.95□□□□□ -0.66
CPNE1-214ENST00000435747 DLG4P78352 724 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 SHBQ15464 509 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 KIF26BQ2KJY2 2108 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 ARL13BQ3SXY8 428 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 CRYBG3Q68DQ2 2970 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 C4orf50Q6ZRC1 276 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 GOLGA5Q8TBA6 731 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 MYCBPAPQ8TBZ2 947 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 EXTL1Q92935 676 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 MYLPFQ96A32 169 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 PCED1BQ96HM7 432 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 CEP295NLQ96MC4 621 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 DEPDC7Q96QD5 511 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 BBS2Q9BXC9 721 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 TRAF3IP3Q9Y228 551 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 F8P00451 2351 aa10.95□□□□□ -0.66
CPNE1-214ENST00000435747 CELSR2Q9HCU4 2923 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 NPC1O15118 1278 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 TSPAN3O60637 253 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 EXOC3O60645 756 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 PPFIA2O75334 1257 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 SEMA4FO95754 770 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 RPN1P04843 607 aaKnown RBP10.94□□□□□ -0.66
CPNE1-214ENST00000435747 FAM87AP0C7U9 286 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 EPHA8P29322 1005 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-214ENST00000435747 RBMS1P29558 406 aaKnown RBP10.94□□□□□ -0.66
CPNE1-214ENST00000435747 ATICP31939 592 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 ARRB1P49407 418 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-214ENST00000435747 RACK1P63244 317 aaKnown RBP10.94□□□□□ -0.66
CPNE1-214ENST00000435747 NFIL3Q16649 462 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 WDR72Q3MJ13 1102 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 ZACNQ401N2 412 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 ZCWPW2Q504Y3 356 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 VSTM1Q6UX27 236 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 KRBA2Q6ZNG9 492 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 SEMA3CQ99985 751 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 TTLL2Q9BWV7 592 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 SCAND2PQ9GZW5 306 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-214ENST00000435747 DPEP3Q9H4B8 488 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 EXOC1Q9NV70 894 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 WDR70Q9NW82 654 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 WDR35Q9P2L0 1181 aa10.94□□□□□ -0.66
CPNE1-214ENST00000435747 MAGEC2Q9UBF1 373 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-214ENST00000435747 PLEKHB1Q9UF11 243 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-214ENST00000435747 CSMD1Q96PZ7 3565 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 MAPK13O15264 365 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 NR3C1P04150 777 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 ITGB2P05107 769 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 PDGFRBP09619 1106 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 IRF1P10914 325 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 BDNFP23560 247 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 SYKP43405 635 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 COPAP53621 1224 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 CDH8P55286 799 aa10.93□□□□□ -0.66
CPNE1-214ENST00000435747 NOP14P78316 857 aaKnown RBP10.93□□□□□ -0.66
CPNE1-214ENST00000435747 FOXK1P85037 733 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms