RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CCR1P32246 355 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 PXNP49023 591 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-207ENST00000435455 PITX1P78337 314 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-207ENST00000435455 ARID5AQ03989 594 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 MTA1Q13330 715 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 EIF4EBP2Q13542 120 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-207ENST00000435455 EIF4HQ15056 248 aaKnown RBP16.87■□□□□ 0.29
SMPD4-207ENST00000435455 EGFLAMQ63HQ2 1017 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 RNF43Q68DV7 783 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 NADSYN1Q6IA69 706 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 SDE2Q6IQ49 451 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 RFWD3Q6PCD5 774 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 UCMAQ8WVF2 138 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 RNF34Q969K3 372 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 NAP1L5Q96NT1 182 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-207ENST00000435455 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMPD4-207ENST00000435455 STAP1Q9ULZ2 295 aa16.87■□□□□ 0.29
SMPD4-207ENST00000435455 SYNJ2BP-COX16A0A087WUM0 186 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 GOLGA8SH3BPF8 625 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 HRO43593 1189 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 TIMM44O43615 452 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 TBL1XO60907 577 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 ADAM23O75077 832 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 MMP8P22894 467 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 HOXC13P31276 330 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 SLC6A4P31645 630 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 RNASE9P60153 205 aaKnown RBP16.86■□□□□ 0.29
SMPD4-207ENST00000435455 FANCCQ00597 558 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 SIM2Q14190 667 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-207ENST00000435455 NR1I3Q14994 352 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 TMEM92Q6UXU6 159 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 CEP68Q76N32 757 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 WFIKKN2Q8TEU8 576 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 GAB3Q8WWW8 586 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 EDEM3Q9BZQ6 932 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 COX16Q9P0S2 106 aa16.86■□□□□ 0.29
SMPD4-207ENST00000435455 KCNU1A8MYU2 1149 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 F9P00740 461 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 NSFP46459 744 aaKnown RBP16.85■□□□□ 0.29
SMPD4-207ENST00000435455 GEN1Q17RS7 908 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 CLEC16AQ2KHT3 1053 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 MS4A13Q5J8X5 152 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 LAIR1Q6GTX8 287 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 SND1Q7KZF4 910 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMPD4-207ENST00000435455 ARCQ7LC44 396 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 RASSF3Q86WH2 238 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 CHSY1Q86X52 802 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 CCDC117Q8IWD4 279 aaPredicted RBP16.85■□□□□ 0.29
SMPD4-207ENST00000435455 CHPFQ8IZ52 775 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■■■□□ 17.7
SMPD4-207ENST00000435455 BAP1Q92560 729 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 RUBCNQ92622 972 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 NT5C3BQ969T7 300 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 PGAP3Q96FM1 320 aaPredicted RBP16.85■□□□□ 0.29
SMPD4-207ENST00000435455 NPY6RQ99463 290 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 AGPAT1Q99943 283 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 NUCKS1Q9H1E3 243 aaKnown RBP16.85■□□□□ 0.29
SMPD4-207ENST00000435455 ZDHHC4Q9NPG8 344 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 ELOVL2Q9NXB9 296 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 HCN2Q9UL51 889 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 CLEC4EQ9ULY5 219 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 PAXBP1Q9Y5B6 917 aa16.85■□□□□ 0.29
SMPD4-207ENST00000435455 M0QYT0 321 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 ZBTB24O43167 697 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-207ENST00000435455 RPP40O75818 363 aaKnown RBP16.84■□□□□ 0.29
SMPD4-207ENST00000435455 CALB1P05937 261 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 UNGP13051 313 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-207ENST00000435455 HOXB2P14652 356 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 TACR2P21452 398 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 SGSHP51688 502 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 UBASH3AP57075 661 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 CENPCQ03188 943 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 NME3Q13232 169 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 SRSF5Q13243 272 aaKnown RBP16.84■□□□□ 0.29
SMPD4-207ENST00000435455 SLC25A52Q3SY17 297 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 C2CD6Q53TS8 623 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 ANO7Q6IWH7 933 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 MMS22LQ6ZRQ5 1243 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 IRF2BP2Q7Z5L9 587 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 LGI2Q8N0V4 545 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 SLC30A5Q8TAD4 765 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 PRICKLE1Q96MT3 831 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-207ENST00000435455 CIPCQ9C0C6 399 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 ABCB8Q9NUT2 735 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 SEPT11Q9NVA2 429 aaKnown RBP16.84■□□□□ 0.29
SMPD4-207ENST00000435455 STIM2Q9P246 746 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 NCDNQ9UBB6 729 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 XPO7Q9UIA9 1087 aaKnown RBP16.84■□□□□ 0.29
SMPD4-207ENST00000435455 TMEM59LQ9UK28 342 aa16.84■□□□□ 0.29
SMPD4-207ENST00000435455 TCRBV21S2A2A0A5A6 115 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 FAM170AA1A519 330 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 F5H5T6 163 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 PABPC1P11940 636 aaKnown RBP16.83■□□□□ 0.28
SMPD4-207ENST00000435455 HLA-FP30511 346 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 FLT3P36888 993 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 WASP42768 502 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 CXCR3P49682 368 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 SULT1E1P49888 294 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 RPS24P62847 133 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms