RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TTC24A2A3L6 582 aaPredicted RBP16.05■□□□□ 0.16
SCARF1-203ENST00000434376 MAP3K13O43283 966 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 DNAJC6O75061 913 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 LYPLA1O75608 230 aaPredicted RBP16.05■□□□□ 0.16
SCARF1-203ENST00000434376 VAV1P15498 845 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 GM2AP17900 193 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 CALB2P22676 271 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 UNC5AQ6ZN44 842 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 RSPH3Q86UC2 560 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 PAK5Q9P286 719 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 SFMBT1Q9UHJ3 866 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 ZFP69BQ9UJL9 534 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 CHKBQ9Y259 395 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 MGAMO43451 1857 aa16.05■□□□□ 0.16
SCARF1-203ENST00000434376 EEF2KO00418 725 aaKnown RBP16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PTGESO14684 152 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 ITGB1P05556 798 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 SERPINB3P29508 390 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 MTFR1Q15390 333 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 CHI3L2Q15782 390 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PLEKHG4Q58EX7 1191 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 ANO7Q6IWH7 933 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PPP1R2P3Q6NXS1 205 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PCGF5Q86SE9 256 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 HIPK4Q8NE63 616 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 SHCBP1Q8NEM2 672 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PCED1BQ96HM7 432 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 SRPK1Q96SB4 655 aaKnown RBP16.04■□□□□ 0.16
SCARF1-203ENST00000434376 TMEM109Q9BVC6 243 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 TSSK1BQ9BXA7 367 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 ACSS3Q9H6R3 686 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 MANSC1Q9H8J5 431 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 CAB39LQ9H9S4 337 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 GABRQQ9UN88 632 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PSAT1Q9Y617 370 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 RRN3P2A6NIE6 340 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 STIP1P31948 543 aaKnown RBP16.04■□□□□ 0.16
SCARF1-203ENST00000434376 AVPR1AP37288 418 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 CXCR3P49682 368 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 FYB2Q5VWT5 728 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 RFWD3Q6PCD5 774 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 NLRP9Q7RTR0 991 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 CAND1Q86VP6 1230 aaKnown RBP16.04■□□□□ 0.16
SCARF1-203ENST00000434376 TNS4Q8IZW8 715 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 EFCAB3Q8N7B9 438 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 SMG8Q8ND04 991 aaKnown RBP16.04■□□□□ 0.16
SCARF1-203ENST00000434376 STK32AQ8WU08 396 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 RNF139Q8WU17 664 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 ANLNQ9NQW6 1124 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 TRMT13Q9NUP7 481 aaKnown RBP16.04■□□□□ 0.16
SCARF1-203ENST00000434376 FAM200BP0CF97 657 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 ITKQ08881 620 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 INCA1Q0VD86 236 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 DLG2Q15700 870 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PCSK7Q16549 785 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 KLHL38Q2WGJ6 581 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 ZNF410Q86VK4 478 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 P2RY11Q96G91 374 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 DDX50Q9BQ39 737 aaKnown RBP16.04■□□□□ 0.16
SCARF1-203ENST00000434376 SYT15Q9BQS2 421 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PPARGC1AQ9UBK2 798 aaKnown RBP16.04■□□□□ 0.16
SCARF1-203ENST00000434376 PACSIN3Q9UKS6 424 aa16.04■□□□□ 0.16
SCARF1-203ENST00000434376 IQANK1A0A1B0GTG1 560 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 MDM4O15151 490 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 OAS1P00973 400 aaKnown RBP16.03■□□□□ 0.16
SCARF1-203ENST00000434376 JCHAINP01591 159 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 UBTFL6P0CB48 400 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-203ENST00000434376 GLRBP48167 497 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 ALDH18A1P54886 795 aaKnown RBP16.03■□□□□ 0.16
SCARF1-203ENST00000434376 KLC1Q07866 573 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 RCN1Q15293 331 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 SPDYCQ5MJ68 293 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 GDF6Q6KF10 455 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-203ENST00000434376 ALYREFQ86V81 257 aaKnown RBP16.03■□□□□ 0.16
SCARF1-203ENST00000434376 DCAKDQ8WVC6 231 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 TFB1MQ8WVM0 346 aaKnown RBP16.03■□□□□ 0.16
SCARF1-203ENST00000434376 TNIP3Q96KP6 325 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 CCDC134Q9H6E4 229 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 ABI2Q9NYB9 513 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-203ENST00000434376 RPS6KL1Q9Y6S9 549 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 CEP290O15078 2479 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 GOLGA8CPA6NN73 597 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 C9IYK1 514 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 F2P00734 622 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 GJA9P57773 515 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 TPI1P60174 286 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 FNIP1Q8TF40 1166 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 HTR3CQ8WXA8 447 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 STMN2Q93045 179 aa16.03■□□□□ 0.16
SCARF1-203ENST00000434376 DENND2DQ9H6A0 471 aaPredicted RBP16.03■□□□□ 0.16
SCARF1-203ENST00000434376 NT5C1B-RDH14C9J2C7 533 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 PEX11AO75192 247 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 THP07101 528 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 PAPOLAP51003 745 aaKnown RBP16.02■□□□□ 0.16
SCARF1-203ENST00000434376 TFAP2DQ7Z6R9 452 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 ANKLE1Q8NAG6 615 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 ZNF669Q96BR6 464 aaPredicted RBP16.02■□□□□ 0.16
SCARF1-203ENST00000434376 SGF29Q96ES7 293 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 ZNF560Q96MR9 790 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 TRIM4Q9C037 500 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms