RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 STRIP2Q9ULQ0 834 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 A0A0B4J203 849 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 C2orf71A6NGG8 1288 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 LRRIQ4A6NIV6 560 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 POC1B-GALNT4F8VUJ3 575 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 PEX14O75381 377 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 PLS3P13797 630 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZNF182P17025 639 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 CSTF2P33240 577 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 NKX2-5P52952 324 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 DSC3Q14574 896 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 CDK10Q15131 360 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 DLG2Q15700 870 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 PGS1Q32NB8 556 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 RALGPS1Q5JS13 557 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 GPR107Q5VW38 600 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 FIP1L1Q6UN15 594 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 GPBP1Q86WP2 473 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZCCHC9Q8N567 271 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 CERKQ8TCT0 537 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 DLG3Q92796 817 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 CCDC124Q96CT7 223 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 VRTNQ9H8Y1 702 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 GPN2Q9H9Y4 310 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 LIN7BQ9HAP6 207 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 GIMAP4Q9NUV9 329 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 AP3M1Q9Y2T2 418 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 KDM3AQ9Y4C1 1321 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 ANKRD62A6NC57 917 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 NDUFA2O43678 99 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 MAN1A2O60476 641 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 COL6A1P12109 1028 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 MAP4P27816 1152 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 STAT3P40763 770 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 ETV4P43268 484 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 GYG1P46976 350 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 OR3A3P47888 321 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 CLK1P49759 484 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 JAM2P57087 298 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 HERC3Q15034 1050 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 C5orf22Q49AR2 442 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 MDH1BQ5I0G3 518 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 PERM1Q5SV97 790 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 TRAPPC3LQ5T215 181 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 RNF207Q6ZRF8 634 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 HPS6Q86YV9 775 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 ARMC8Q8IUR7 673 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 HIPK4Q8NE63 616 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 LHFPL5Q8TAF8 219 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 CELF1Q92879 486 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 PMEPA1Q969W9 287 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 FEM1CQ96JP0 617 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 POP1Q99575 1024 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 TM9SF2Q99805 663 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZKSCAN3Q9BRR0 538 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 CNTN3Q9P232 1028 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 KLQ9UEF7 1012 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 ST14Q9Y5Y6 855 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 DLEC1Q9Y238 1755 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 DUOX1Q9NRD9 1551 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 PRSS51A0A1B0GVH4 220 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 SDR42E2A6NKP2 422 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 PP2D1A8MPX8 630 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 MEI4A8MW99 385 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 FSCN2O14926 492 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 PDPK1O15530 556 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 SPOPO43791 374 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 PROCP04070 461 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 UGT2B4P06133 528 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 PTPN9P43378 593 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 TRAP1Q12931 704 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 NFE2L1Q14494 772 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 RAB39AQ14964 217 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 CCDC142Q17RM4 750 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 DGKHQ86XP1 1220 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 LACC1Q8IV20 430 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 BEND7Q8N7W2 519 aaPredicted RBP9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 SDR42E1Q8WUS8 393 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 MTMR9Q96QG7 549 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 TARS2Q9BW92 718 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 ACAT2Q9BWD1 397 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 AKIP1Q9NQ31 210 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 FARSBQ9NSD9 589 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 PKD2L1Q9P0L9 805 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 ENPP5Q9UJA9 477 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 VPS4AQ9UN37 437 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 EP400Q96L91 3159 aa9.1□□□□□ -0.95
CDC42BPA-206ENST00000429440 TCRBV7S2A1N4TA0A589 114 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 FAM25AB3EWG3 89 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 FAM25CB3EWG5 89 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 FAM25GB3EWG6 89 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 I3L4J1 428 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 INO80B-WBP1J3KQ70 363 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 TRAF5O00463 557 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 RFPL2O75678 378 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 MTA2O94776 668 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 MAP3K6O95382 1288 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 KRT8P05787 483 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 GARTP22102 1010 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 KLRK1P26718 216 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms