RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 RAVER1Q8IY67 606 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-203ENST00000428982 PRELID2Q8N945 189 aa14.83□□□□□ -0.04
SYNGAP1-203ENST00000428982 TMC2Q8TDI7 906 aa14.83□□□□□ -0.04
SYNGAP1-203ENST00000428982 SYTL5Q8TDW5 730 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-203ENST00000428982 MRPL9Q9BYD2 267 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-203ENST00000428982 KCNH7Q9NS40 1196 aa14.83□□□□□ -0.04
SYNGAP1-203ENST00000428982 IP6K2Q9UHH9 426 aa14.83□□□□□ -0.04
SYNGAP1-203ENST00000428982 TIMM22Q9Y584 194 aa14.83□□□□□ -0.04
SYNGAP1-203ENST00000428982 ATF7P17544 494 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 GNG2P59768 71 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 CYP2A13Q16696 494 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 CGB2Q6NT52 195 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 CATSPERGQ6ZRH7 1159 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 OTOP1Q7RTM1 612 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 TCAIMQ8N3R3 496 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 VPS37AQ8NEZ2 397 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 LRRC19Q9H756 370 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 JPH1Q9HDC5 661 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 HMG20AQ9NP66 347 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 SLC9A2Q9UBY0 812 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 SNX9Q9Y5X1 595 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 NAV1Q8NEY1 1877 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 ILVBLA1L0T0 632 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 FAM86B1E9PN63 330 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 PPP1R11O60927 126 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 FAM86B2P0C5J1 330 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 MAPK11Q15759 364 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 SLFN12LQ6IEE8 588 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 CCDC103Q8IW40 242 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 IRF2BPLQ9H1B7 796 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 ZMYM2Q9UBW7 1377 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 MYH1P12882 1939 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 PSTPIP1O43586 416 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 SLITRK3O94933 977 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 TBXAS1P24557 533 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 ARL4CP56559 192 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 MOGSQ13724 837 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 PHKG1Q16816 387 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 RFPL4BQ6ZWI9 263 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 C12orf56Q8IXR9 622 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 RCOR2Q8IZ40 523 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 ALKBH8Q96BT7 664 aaKnown RBP14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 PLEKHA5Q9HAU0 1116 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 AVENQ9NQS1 362 aaPredicted RBP14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 IFT52Q9Y366 437 aa14.82□□□□□ -0.04
SYNGAP1-203ENST00000428982 LRRIQ4A6NIV6 560 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 MTA2O94776 668 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 TRIM16O95361 564 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 IFNB1P01574 187 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 FUCA1P04066 466 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 CALB1P05937 261 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 KRT7P08729 469 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 MAGEA4P43358 317 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 TAP1Q03518 808 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 PTK6Q13882 451 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 MPP2Q14168 576 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 SF3B4Q15427 424 aaKnown RBP eCLIP14.81□□□□□ -0.042e-6■■■■□ 20.9
SYNGAP1-203ENST00000428982 GPR107Q5VW38 600 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 ITIH5Q86UX2 942 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 KLF6Q99612 283 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 EFHD1Q9BUP0 239 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 GCOM2Q9BZD3 368 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 SHCBP1LQ9BZQ2 653 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 SPATC1LQ9H0A9 340 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 PSMC3IPQ9P2W1 217 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 GABBR1Q9UBS5 961 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 GNEQ9Y223 722 aaKnown RBP14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 PCDHB2Q9Y5E7 798 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 HEMK1Q9Y5R4 338 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 MAST2Q6P0Q8 1798 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 SLC16A4O15374 487 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 BDNFP23560 247 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 PDK1Q15118 436 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 ZDHHC24Q6UX98 284 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 GPRASP2Q96D09 838 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 ANKEF1Q9NU02 776 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 NINJ2Q9NZG7 142 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 GINS2Q9Y248 185 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 ARHGEF9O43307 516 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 AQP9O43315 295 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 USP2O75604 605 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 CYP1A2P05177 515 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 ADRA1DP25100 572 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 ADSLP30566 484 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 SLC25A3Q00325 362 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 CARTPTQ16568 116 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 C6orf52Q5T4I8 152 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 SLC20A1Q8WUM9 679 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 FAM167AQ96KS9 214 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 HSD17B14Q9BPX1 270 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 AP5M1Q9H0R1 490 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 SIAEQ9HAT2 523 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 C8orf4Q9NR00 106 aa14.81□□□□□ -0.04
SYNGAP1-203ENST00000428982 GOLGA8MH3BSY2 632 aa14.8□□□□□ -0.04
SYNGAP1-203ENST00000428982 TSPAN1O60635 241 aa14.8□□□□□ -0.04
SYNGAP1-203ENST00000428982 COPZ1P61923 177 aa14.8□□□□□ -0.04
SYNGAP1-203ENST00000428982 TCEAL1Q15170 157 aa14.8□□□□□ -0.04
SYNGAP1-203ENST00000428982 PKN2Q16513 984 aaKnown RBP14.8□□□□□ -0.04
SYNGAP1-203ENST00000428982 SPOPLQ6IQ16 392 aa14.8□□□□□ -0.04
SYNGAP1-203ENST00000428982 SWSAP1Q6NVH7 229 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms