RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TPGS1Q6ZTW0 290 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZDHHC17Q8IUH5 632 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 GSPT2Q8IYD1 628 aaKnown RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 SYCE1Q8N0S2 351 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 NPWQ8N729 165 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 NIPA2Q8N8Q9 360 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 IGSF8Q969P0 613 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 RSPRY1Q96DX4 576 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 FCRL2Q96LA5 508 aaPredicted RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 RPP25Q9BUL9 199 aaKnown RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 TRIM31Q9BZY9 425 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 TRPM5Q9NZQ8 1165 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 FZD10Q9ULW2 581 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 CLEC4EQ9ULY5 219 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 HS3ST4Q9Y661 456 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 MTCH2Q9Y6C9 303 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 LRIG2O94898 1065 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 RTN3O95197 1032 aaPredicted RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 IGLV3-25P01717 112 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 OAS2P29728 719 aaKnown RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 TBX4P57082 545 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 RPS24P62847 133 aaKnown RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 SMAD3P84022 425 aaKnown RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 KCNC3Q14003 757 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 KRT81Q14533 505 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 SIX1Q15475 284 aaPredicted RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 IFI16Q16666 785 aaKnown RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 PABPC1LQ4VXU2 614 aaKnown RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ERMARDQ5T6L9 678 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 CCDC181Q5TID7 509 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 BNIPLQ7Z465 357 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 PQLC3Q8N755 202 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 FNIP1Q8TF40 1166 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 GDAP1L1Q96MZ0 367 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 PNKPQ96T60 521 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 KRT12Q99456 494 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 TTLL2Q9BWV7 592 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 OSBPL8Q9BZF1 889 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 DNAI2Q9GZS0 605 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ADAM7Q9H2U9 754 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 SMOC2Q9H3U7 446 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ASAH2Q9NR71 780 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 STIM2Q9P246 746 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 AMACRQ9UHK6 382 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 RWDD3Q9Y3V2 267 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 COL4A3Q01955 1670 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CCDC66A2RUB6 948 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CTAGE15A4D2H0 777 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 KRIT1O00522 736 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 DPYSL4O14531 572 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 STC2O76061 302 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 OAS1P00973 400 aaKnown RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 TUBBP07437 444 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CTAGE8P0CG41 777 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CORO1AP31146 461 aaKnown RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 ATP5C1P36542 298 aaKnown RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 TFF2Q03403 129 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 MESP2Q0VG99 397 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 EIF4EBP2Q13542 120 aaPredicted RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 SKIV2LQ15477 1246 aaKnown RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 HECTD3Q5T447 861 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 PDZD4Q76G19 769 aaPredicted RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CTAGE6Q86UF2 777 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 DDX42Q86XP3 938 aaKnown RBP eCLIP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 RFX6Q8HWS3 928 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CTAGE4Q8IX94 777 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 UBL4BQ8N7F7 174 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 PRELID2Q8N945 189 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 SPATA4Q8NEY3 305 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 C2orf15Q8WU43 125 aaKnown RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 TRIM51Q9BSJ1 452 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 LRRC1Q9BTT6 524 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZDHHC4Q9NPG8 344 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 STAP1Q9ULZ2 295 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 SDK1Q7Z5N4 2213 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 hCG_1818297A0A087WSY0 165 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 TTC24A2A3L6 582 aaPredicted RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 GJB3O75712 270 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 WEE1P30291 646 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CXCR3P49682 368 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 GDF10P55107 478 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 UBE3AQ05086 875 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 ODF2Q5BJF6 829 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 POLNQ7Z5Q5 900 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 SLC13A5Q86YT5 568 aaPredicted RBP9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 BBS7Q8IWZ6 715 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 PLD5Q8N7P1 536 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 MYRFLQ96LU7 910 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CSPG4P5Q96PW8 444 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 LGMNQ99538 433 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 TMEM121Q9BTD3 319 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CYLDQ9NQC7 956 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 CFAP97Q9P2B7 532 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 DNPEPQ9ULA0 475 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 NEU3Q9UQ49 428 aa9.85□□□□□ -0.83
HMGCLL1-206ENST00000428842 OTOL1A6NHN0 477 aaPredicted RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 EPHB2P29323 1055 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 SLC1A1P43005 524 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 ARSEP51690 589 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 TNK2Q07912 1038 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms