RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 SFMBT2Q5VUG0 894 aa12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 ZNF776Q68DI1 518 aaPredicted RBP12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 CCDC127Q96BQ5 260 aa12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 VCPIP1Q96JH7 1222 aa12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 SDCBP2Q9H190 292 aa12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 XYLT2Q9H1B5 865 aa12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 TMEM245Q9H330 911 aa12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 AGO1Q9UL18 857 aaKnown RBP12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 ZNF510Q9Y2H8 683 aa12.16□□□□□ -0.46
ALMS1P1-201ENST00000428767 A0A1W2PR77 199 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 USP12O75317 370 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 NTRK1P04629 796 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 FAM163BP0C2L3 166 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 ACP1P24666 158 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 GJB2P29033 226 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 GALCP54803 685 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 DAB2P98082 770 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 ZBTB16Q05516 673 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 ALCAMQ13740 583 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 KCNJ12Q14500 433 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 ZNF699Q32M78 642 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 KLHDC10Q6PID8 442 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 CHST9Q7L1S5 443 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 KANSL1Q7Z3B3 1105 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 CACTIN-AS1Q8N1I8 211 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 C12orf29Q8N999 325 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 SYAP1Q96A49 352 aaPredicted RBP12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 EPSTI1Q96J88 318 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 PABPC3Q9H361 631 aaKnown RBP12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 OLFML3Q9NRN5 406 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 FBXL12Q9NXK8 326 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 HMGXB4Q9UGU5 601 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 NCKAP1Q9Y2A7 1128 aa12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 SPTAN1Q13813 2472 aaKnown RBP12.15□□□□□ -0.46
ALMS1P1-201ENST00000428767 RELNP78509 3460 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 TLN1Q9Y490 2541 aaKnown RBP12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 A0A1W2PP55 124 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 HHLA1C9JL84 531 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 KIAA0391O15091 583 aaKnown RBP12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 TIMM44O43615 452 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 SIGLEC6O43699 453 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 PHACTR2O75167 634 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 FAM200BP0CF97 657 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 HOXD9P28356 352 aaPredicted RBP12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 HLA-FP30511 346 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 CYP2J2P51589 502 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 NXPH1P58417 271 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 SNRNP35Q16560 246 aaKnown RBP12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 CLEC20AQ6ZU45 233 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 SV2BQ7L1I2 683 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 ZC3H3Q8IXZ2 948 aaKnown RBP12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 HPS3Q969F9 1004 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 SERAC1Q96JX3 654 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 SLC2A11Q9BYW1 496 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 DPH1Q9BZG8 443 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 DCLK3Q9C098 648 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 FBRSQ9HAH7 460 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 CSNK1G1Q9HCP0 422 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 ASCL3Q9NQ33 180 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 ABCB8Q9NUT2 735 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 PANK4Q9NVE7 773 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 WDR70Q9NW82 654 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 PLA2G4CQ9UP65 541 aa12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 COL27A1Q8IZC6 1860 aaPredicted RBP12.14□□□□□ -0.47
ALMS1P1-201ENST00000428767 MYO9AB2RTY4 2548 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 LRRC72A6NJI9 287 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 K7ENP7 123 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 TLR4O00206 839 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 TRIM38O00635 465 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 TERTO14746 1132 aaKnown RBP12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 MID1O15344 667 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 CSO75390 466 aaKnown RBP12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 KIF20AO95235 890 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 RALAP11233 206 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 ERVPABLB-1P60509 514 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 COG7P83436 770 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 E2F1Q01094 437 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 CYP24A1Q07973 514 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 EHHADHQ08426 723 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 BIRC3Q13489 604 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 PSMD6Q15008 389 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 ZNF667Q5HYK9 610 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 INO80CQ6PI98 192 aaPredicted RBP12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 TMC6Q7Z403 805 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 TADA2BQ86TJ2 420 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 SPATS2Q86XZ4 545 aaKnown RBP12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 CPXM2Q8N436 756 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 EXD3Q8N9H8 876 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 OR2T34Q8NGX1 318 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 WFIKKN2Q8TEU8 576 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 SNRNP27Q8WVK2 155 aaKnown RBP12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 DEPDC7Q96QD5 511 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 POLR1BQ9H9Y6 1135 aa12.13□□□□□ -0.47
ALMS1P1-201ENST00000428767 THSD1Q9NS62 852 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms