RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 LGALS13Q9UHV8 139 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 ACTL7AQ9Y615 435 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 ARL5CA6NH57 179 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 ALOX15BO15296 676 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 STRNO43815 780 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 TSPAN3O60637 253 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 ABHD2P08910 425 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 EPHB2P29323 1055 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 RPL10AP62906 217 aaKnown RBP8.64□□□□□ -1.03
CD44-208ENST00000428726 IL9RQ01113 521 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 FBXO48Q5FWF7 155 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 CERCAMQ5T4B2 595 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 CES4AQ5XG92 561 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 RPS27LQ71UM5 84 aaKnown RBP8.64□□□□□ -1.03
CD44-208ENST00000428726 ALYREFQ86V81 257 aaKnown RBP8.64□□□□□ -1.03
CD44-208ENST00000428726 LRRTM3Q86VH5 581 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 NDUFAF2Q8N183 169 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 LINC01465Q8N7H1 131 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 TTC13Q8NBP0 860 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 CKAP2Q8WWK9 683 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 ZNF75CPQ92670 426 aaPredicted RBP8.64□□□□□ -1.03
CD44-208ENST00000428726 TTC25Q96NG3 672 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 FRMD8P1Q9BZ68 369 aaPredicted RBP8.64□□□□□ -1.03
CD44-208ENST00000428726 VRTNQ9H8Y1 702 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 KLHL14Q9P2G3 628 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 MCM8Q9UJA3 840 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
CD44-208ENST00000428726 MTF2Q9Y483 593 aaPredicted RBP8.64□□□□□ -1.03
CD44-208ENST00000428726 KNL1Q8NG31 2342 aa8.64□□□□□ -1.03
CD44-208ENST00000428726 RNF103O00237 685 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 TRPA1O75762 1119 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 F2P00734 622 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 JCHAINP01591 159 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ASGR1P07306 291 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 PIRTP0C851 137 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ETFBP38117 255 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 MORF4L2Q15014 288 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 FAM110CQ1W6H9 321 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 PREPLQ4J6C6 727 aaPredicted RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 TAF1BQ53T94 588 aaPredicted RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 UNC5AQ6ZN44 842 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 CLEC20AQ6ZU45 233 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 PIGWQ7Z7B1 504 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 LDB1Q86U70 411 aaPredicted RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 ZNF280BQ86YH2 543 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 MAP7D3Q8IWC1 876 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 RIBC1Q8N443 379 aaPredicted RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 DCLK2Q8N568 766 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 NPWQ8N729 165 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 GSTCDQ8NEC7 633 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 DTX3LQ8TDB6 740 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 GTF3C2Q8WUA4 911 aaPredicted RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 MFSD3Q96ES6 412 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 C20orf27Q9GZN8 174 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 MAN1C1Q9NR34 630 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.63□□□□□ -1.03
CD44-208ENST00000428726 UBQLN1Q9UMX0 589 aaKnown RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 FARP1Q9Y4F1 1045 aaPredicted RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 NRCAMQ92823 1304 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ENDOD1O94919 500 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 MT-CO1P00395 513 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ARL4AP40617 200 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 NCALDP61601 193 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 KDSRQ06136 332 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ITKQ08881 620 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 NR1H3Q13133 447 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ITIH4Q14624 930 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ACAP1Q15027 740 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 IQSEC1Q6DN90 963 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 SLC25A41Q8N5S1 370 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 POU5F2Q8N7G0 328 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ATP11CQ8NB49 1132 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 FBXO27Q8NI29 283 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ZC3H15Q8WU90 426 aaKnown RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 ERLEC1Q96DZ1 483 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 P2RY11Q96G91 374 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 CLPTM1LQ96KA5 538 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 SMOQ99835 787 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 OXCT2Q9BYC2 517 aaPredicted RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 BRD8Q9H0E9 1235 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 PSMC3IPQ9P2W1 217 aaPredicted RBP8.63□□□□□ -1.03
CD44-208ENST00000428726 PADI3Q9ULW8 664 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 C2CD2Q9Y426 696 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 ACTL7BQ9Y614 415 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 COL1A2P08123 1366 aa8.63□□□□□ -1.03
CD44-208ENST00000428726 MEI4A8MW99 385 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 PMPCBO75439 489 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 SUN1O94901 812 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 PRKCGP05129 697 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 ERCC2P18074 760 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 CA8P35219 290 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 CHRNA4P43681 627 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 OR1G1P47890 313 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 TMPRSS15P98073 1019 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 PURAQ00577 322 aaKnown RBP8.62□□□□□ -1.03
CD44-208ENST00000428726 BST2Q10589 180 aaKnown RBP8.62□□□□□ -1.03
CD44-208ENST00000428726 KCNA10Q16322 511 aa8.62□□□□□ -1.03
CD44-208ENST00000428726 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
CD44-208ENST00000428726 NCBP2-AS2Q69YL0 99 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms