RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 IGSF8Q969P0 613 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 BIRC7Q96CA5 298 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 ULBP1Q9BZM6 244 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 UBXN6Q9BZV1 441 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 TMEM245Q9H330 911 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 TMEM8AQ9HCN3 771 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 OSGEPQ9NPF4 335 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 CISHQ9NSE2 258 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 ABCB8Q9NUT2 735 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 MUC22E2RYF6 1773 aaPredicted RBP19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 H0Y8X5 98 aa19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 ZSCAN22P10073 491 aaPredicted RBP19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 CD27P26842 260 aa19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 RPS14P62263 151 aaKnown RBP19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 IL9RQ01113 521 aa19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 PDCD7Q8N8D1 485 aaKnown RBP19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 RNF139Q8WU17 664 aa19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 TMEM176AQ96HP8 235 aa19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 FBRSQ9HAH7 460 aa19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 OLA1Q9NTK5 396 aaKnown RBP19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 GGA2Q9UJY4 613 aa19.11■□□□□ 0.65
UPK3BP1-201ENST00000428678 F13A1P00488 732 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 BCAT1P54687 386 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 RAD23BP54727 409 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 ZBTB16Q05516 673 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 CAMK2BQ13554 666 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 SMAD1Q15797 465 aaKnown RBP19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 PTPRNQ16849 979 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 INAVAQ3KP66 663 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 TTC31Q49AM3 519 aaPredicted RBP19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 ARHGAP17Q68EM7 881 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 DHRS13Q6UX07 377 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 AHI1Q8N157 1196 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 TTC39CQ8N584 583 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 ANKRD52Q8NB46 1076 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 TMA16Q96EY4 203 aaKnown RBP19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 PRSS16Q9NQE7 514 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 FTSJ1Q9UET6 329 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 MAPK8IP1Q9UQF2 711 aa19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 HBS1LQ9Y450 684 aaKnown RBP19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 TP53BP1Q12888 1972 aaPredicted RBP19.1■□□□□ 0.65
UPK3BP1-201ENST00000428678 TULP2O00295 520 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 PCDHGA12O60330 932 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 DLDP09622 509 aaKnown RBP19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 PABPC1P11940 636 aaKnown RBP19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 PSMC2P35998 433 aaKnown RBP19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 ZNF445P59923 1031 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 PDE4CQ08493 712 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 GOLGA7BQ2TAP0 167 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 KCNT1Q5JUK3 1230 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 MBLAC2Q68D91 279 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 KRT39Q6A163 491 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 PM20D1Q6GTS8 502 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 BHLHA9Q7RTU4 235 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 ADIPOR2Q86V24 386 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 SCUBE3Q8IX30 993 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 GANCQ8TET4 914 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 EDEM1Q92611 657 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 SEMA4DQ92854 862 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 CCDC47Q96A33 483 aaKnown RBP19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 CRELD1Q96HD1 420 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 IPO9Q96P70 1041 aaKnown RBP19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 LRRC4Q9HBW1 653 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 SGK2Q9HBY8 427 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 SFMBT1Q9UHJ3 866 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 CFAP45Q9UL16 551 aa19.09■□□□□ 0.65
UPK3BP1-201ENST00000428678 A0A087WV48 116 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 A0A1B0GVL5 298 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 MYL1P05976 194 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 ATP5BP06576 529 aaKnown RBP19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 PFKFB1P16118 471 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 RPL13P26373 211 aaKnown RBP19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 CTSKP43235 329 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 C21orf59P57076 290 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 ENPEPQ07075 957 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 NFIL3Q16649 462 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 ADGRF1Q5T601 910 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 ZNF776Q68DI1 518 aaPredicted RBP19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 ATL3Q6DD88 541 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 ZC3H3Q8IXZ2 948 aaKnown RBP19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 GOLGA1Q92805 767 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 DCBLD2Q96PD2 775 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 USP25Q9UHP3 1055 aa19.08■□□□□ 0.64
UPK3BP1-201ENST00000428678 FAM47DPA6NHR8 397 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 XPO1O14980 1071 aaKnown RBP19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 MSI1O43347 362 aaKnown RBP19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 LATS1O95835 1130 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 C7P10643 843 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 POLR2EP19388 210 aaKnown RBP19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 GTF2H1P32780 548 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 MXI1P50539 228 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 SGSHP51688 502 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 DNM1Q05193 864 aaKnown RBP19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 ADIGQ0VDE8 80 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 ADAM9Q13443 819 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 BSPRYQ5W0U4 402 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 FBXL13Q8NEE6 735 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 TATDN2Q93075 761 aa19.07■□□□□ 0.64
UPK3BP1-201ENST00000428678 FAXDC2Q96IV6 333 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms