RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 CCDC33Q8N5R6 958 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 ARL14EPQ8N8R7 260 aaPredicted RBP12.48□□□□□ -0.41
RFC4-206ENST00000427785 ATP6V0D2Q8N8Y2 350 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 SHKBP1Q8TBC3 707 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 HDAC7Q8WUI4 952 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 MRPS31Q92665 395 aaKnown RBP12.48□□□□□ -0.41
RFC4-206ENST00000427785 WBP2Q969T9 261 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 MRPL38Q96DV4 380 aaKnown RBP12.48□□□□□ -0.41
RFC4-206ENST00000427785 TCEAL4Q96EI5 215 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 PNKPQ96T60 521 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 HINFPQ9BQA5 517 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 RCOR3Q9P2K3 495 aaPredicted RBP12.48□□□□□ -0.41
RFC4-206ENST00000427785 DNPEPQ9ULA0 475 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 EFR3BQ9Y2G0 817 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 HBS1LQ9Y450 684 aaKnown RBP12.48□□□□□ -0.41
RFC4-206ENST00000427785 HS3ST4Q9Y661 456 aa12.48□□□□□ -0.41
RFC4-206ENST00000427785 ZSCAN5CA6NGD5 496 aaPredicted RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 MCF2LO15068 1137 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 DCLK1O15075 740 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 LIASO43766 372 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 STC2O76061 302 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 APOC2P02655 101 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 RHOP08100 348 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 HNRNPA1P09651 372 aaKnown RBP eCLIP12.47□□□□□ -0.41
RFC4-206ENST00000427785 SLC2A3P11169 496 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 TGM2P21980 687 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 IRAK1P51617 712 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 TERF1P54274 439 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 DR1Q01658 176 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 RING1Q06587 406 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 NOMO1Q15155 1222 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 SLC5A9Q2M3M2 681 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 PABPC1LQ4VXU2 614 aaKnown RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 MS4A13Q5J8X5 152 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 MANEALQ5VSG8 457 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 RAP1GAP2Q684P5 730 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 NADSYN1Q6IA69 706 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 CCDC70Q6NSX1 233 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 KLHDC10Q6PID8 442 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 PDZD4Q76G19 769 aaPredicted RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 B4GALNT4Q76KP1 1039 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 C14orf80Q86SX3 495 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 CHSY1Q86X52 802 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 JAMLQ86YT9 394 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 ZNF276Q8N554 614 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 C12orf76Q8N812 135 aaPredicted RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 MAB21L3Q8N8X9 362 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 NETO2Q8NC67 525 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 TTC16Q8NEE8 873 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 PLD4Q96BZ4 506 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 ZNF707Q96C28 371 aaPredicted RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 TBC1D31Q96DN5 1066 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 OSBPL2Q9H1P3 480 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 IGFLR1Q9H665 355 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 LRRC19Q9H756 370 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 C10orf88Q9H8K7 445 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.47□□□□□ -0.41
RFC4-206ENST00000427785 DNMT3BQ9UBC3 853 aaKnown RBP12.47□□□□□ -0.41
RFC4-206ENST00000427785 OR12D3Q9UGF7 316 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 HEY1Q9Y5J3 304 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
RFC4-206ENST00000427785 BRWD1Q9NSI6 2320 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 RANBP2P49792 3224 aaKnown RBP12.46□□□□□ -0.41
RFC4-206ENST00000427785 CCDC195A0A1B0GUA6 201 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 ESYT3A0FGR9 886 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 E9PAM4 449 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 DAPK3O43293 454 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 ECEL1O95672 775 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 GLP2RO95838 553 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 OLFM2O95897 454 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 C1RP00736 705 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 CKMP06732 381 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 SRGAP2BP0DMP2 458 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 ERCC2P18074 760 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 EPHB2P29323 1055 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 CORO1AP31146 461 aaKnown RBP12.46□□□□□ -0.41
RFC4-206ENST00000427785 PTGIRP43119 386 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 RGS19P49795 217 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 KPNA1P52294 538 aaPredicted RBP12.46□□□□□ -0.41
RFC4-206ENST00000427785 EPHA5P54756 1037 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 VCPP55072 806 aaKnown RBP12.46□□□□□ -0.41
RFC4-206ENST00000427785 EIF3EP60228 445 aaKnown RBP12.46□□□□□ -0.41
RFC4-206ENST00000427785 GBE1Q04446 702 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 TEAD2Q15562 447 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 CCNG2Q16589 344 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 TCEAL5Q5H9L2 206 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 GPR158Q5T848 1215 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 NUGGCQ68CJ6 796 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 RWDD4Q6NW29 188 aaKnown RBP12.46□□□□□ -0.41
RFC4-206ENST00000427785 ELMSAN1Q6PJG2 1045 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 RTL10Q7L3V2 364 aa12.46□□□□□ -0.41
RFC4-206ENST00000427785 GRASPQ7Z6J2 395 aaPredicted RBP12.46□□□□□ -0.41
RFC4-206ENST00000427785 CIR1Q86X95 450 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms