RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 DNMT3LQ9UJW3 386 aa10.96□□□□□ -0.65
TCOF1-204ENST00000427724 IGLV3-22A0A075B6J6 115 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 GRXCR1A8MXD5 290 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 CES2O00748 559 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 TBC1D4O60343 1298 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 PPFIA2O75334 1257 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 CALCAP01258 141 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 RALBP11234 206 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 DLG4P78352 724 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 DNAJC3Q13217 504 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 STAT4Q14765 748 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 ZCWPW2Q504Y3 356 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 TAPT1Q6NXT6 567 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 PIGZQ86VD9 579 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 BSNDQ8WZ55 320 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 KLF6Q99612 283 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-204ENST00000427724 NEUROG2Q9H2A3 272 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 ZFP69BQ9UJL9 534 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 APC2O95996 2303 aa10.96□□□□□ -0.66
TCOF1-204ENST00000427724 MEI4A8MW99 385 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 RBAK-RBAKDNI3L0D1 243 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 TUBP50607 506 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 CDR2Q01850 454 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 OTOP3Q7RTS5 596 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 PLIN4Q96Q06 1357 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 A0A0U1RQF3 1178 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 PDZK1P1A8MUH7 402 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 RAMP2O60895 175 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 ALDH1A2O94788 518 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 LYPLA2O95372 231 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 TIMP1P01033 207 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 QPCTQ16769 361 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 ANKLE1Q8NAG6 615 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 GRIN3AQ8TCU5 1115 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 CENPKQ9BS16 269 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 ROPN1BQ9BZX4 212 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-204ENST00000427724 RNF39Q9H2S5 420 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 PDZD7Q9H5P4 517 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 ROPN1Q9HAT0 212 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-204ENST00000427724 PGAP2Q9UHJ9 254 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 NEU2Q9Y3R4 380 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 CFAP69A5D8W1 941 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 A8MX80 341 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 ENPP3O14638 875 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 UBTFL6P0CB48 400 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-204ENST00000427724 RARAP10276 462 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 MAGEA4P43358 317 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 C9orf57Q5W0N0 161 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 ACAD10Q6JQN1 1059 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 RNF135Q8IUD6 432 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 TMEM192Q8IY95 271 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 RAB42Q8N4Z0 105 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 C12orf29Q8N999 325 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 BLOC1S5Q8TDH9 187 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 CRLS1Q9UJA2 301 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 CST8O60676 142 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 SOAT2O75908 522 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 APRTP07741 180 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 SLC1A1P43005 524 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 MAPK9P45984 424 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 FNTAP49354 379 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 KDSRQ06136 332 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 POU5F1BQ06416 359 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 PPP3CAQ08209 521 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 ZC3H12AQ5D1E8 599 aaKnown RBP10.95□□□□□ -0.66
TCOF1-204ENST00000427724 MORN1Q5T089 497 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 TRIM55Q9BYV6 548 aa10.95□□□□□ -0.66
TCOF1-204ENST00000427724 NEDD8-MDP1E9PL57 170 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 NVLO15381 856 aaKnown RBP10.94□□□□□ -0.66
TCOF1-204ENST00000427724 TGFB1I1O43294 461 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 CTSEP14091 401 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 NPR3P17342 541 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 TKTP29401 623 aaKnown RBP10.94□□□□□ -0.66
TCOF1-204ENST00000427724 GJA8P48165 433 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 MYBPC2Q14324 1141 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 PDK1Q15118 436 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ZNF284Q2VY69 593 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 C2orf27AQ580R0 203 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ANKRD20A2Q5SQ80 823 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ANKRD20A1Q5TYW2 823 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 SZRD1Q7Z422 152 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ZNF677Q86XU0 584 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ST13P4Q8IZP2 240 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-204ENST00000427724 TDRD5Q8NAT2 981 aaKnown RBP10.94□□□□□ -0.66
TCOF1-204ENST00000427724 C3orf20Q8ND61 904 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 B4GALNT2Q8NHY0 566 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ALG3Q92685 438 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 TRIM54Q9BYV2 358 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 RHBDL2Q9NX52 303 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 CLCA2Q9UQC9 943 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 RIPK2O43353 540 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 HNRNPCP07910 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
TCOF1-204ENST00000427724 TARSP26639 723 aaKnown RBP10.94□□□□□ -0.66
TCOF1-204ENST00000427724 GDI1P31150 447 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 SH3BGRP55822 239 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-204ENST00000427724 LPIN1Q14693 890 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 ZRANB3Q5FWF4 1079 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 RAP1GAP2Q684P5 730 aa10.94□□□□□ -0.66
TCOF1-204ENST00000427724 MAMDC4Q6UXC1 1216 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms