RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TRIM46Q7Z4K8 759 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 NLRX1Q86UT6 975 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TICAM1Q8IUC6 712 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARMC8Q8IUR7 673 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 NUDCD3Q8IVD9 361 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 UNC45BQ8IWX7 931 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 RHOT1Q8IXI2 618 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 C12orf56Q8IXR9 622 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PALM2Q8IXS6 379 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PPIL6Q8IXY8 311 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 GALNT4Q8N4A0 578 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TDRD5Q8NAT2 981 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 KYQ8NBH2 561 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 GALNT6Q8NCL4 622 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ETNPPLQ8TBG4 499 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PIWIL2Q8TC59 973 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 BLOC1S5Q8TDH9 187 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PSPC1Q8WXF1 523 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SEPT1Q8WYJ6 367 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DHX38Q92620 1227 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ALG3Q92685 438 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 FOXJ1Q92949 421 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CD101Q93033 1021 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TTC17Q96AE7 1141 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CIDECQ96AQ7 238 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC10A4Q96EP9 437 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CDHR1Q96JP9 859 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DEPDC7Q96QD5 511 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ALPK1Q96QP1 1244 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PSKH2Q96QS6 385 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 NACC1Q96RE7 527 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 CDRT15Q96T59 188 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PAFAH2Q99487 392 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 APOL4Q9BPW4 351 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DCUN1D5Q9BTE7 237 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DHRS4Q9BTZ2 278 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PLA2G12BQ9BX93 195 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 MKRN2Q9H000 416 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 RNF38Q9H0F5 515 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 RSPH9Q9H1X1 276 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ADAMTS10Q9H324 1103 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 RPF2Q9H7B2 306 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 SPC25Q9HBM1 224 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PCDH9Q9HC56 1237 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 XAB2Q9HCS7 855 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 MRPL47Q9HD33 250 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 C12orf4Q9NQ89 552 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 GIMAP4Q9NUV9 329 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 BARHL2Q9NY43 387 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 GMIPQ9P107 970 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TBC1D14Q9P2M4 693 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ATP6V1HQ9UI12 483 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 MKL2Q9ULH7 1088 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 VANGL2Q9ULK5 521 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 EIF3LQ9Y262 564 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DRG1Q9Y295 367 aaKnown RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 UGT2A1Q9Y4X1 527 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PCDHGA11Q9Y5H2 935 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TLL2Q9Y6L7 1015 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 TNRQ92752 1358 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 PKD1L3Q7Z443 1732 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARAP2Q8WZ64 1704 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 DIP2BQ9P265 1576 aa5.76□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF335Q9H4Z2 1342 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 FER1L4A9Z1Z3 1794 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRPM3Q9HCF6 1732 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 C1orf232A0A0U1RR37 186 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PNMA8CA0A1B0GUJ8 204 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRR23AA6NEV1 266 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 MYMKA6NI61 221 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 SDR42E2A6NKP2 422 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CENPXA8MT69 81 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 IRS4O14654 1257 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRDMT1O14717 391 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 MSI1O43347 362 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 TADA2AO75478 443 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 BCAS2O75934 225 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARHGEF15O94989 841 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCNE2O96020 404 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PROCP04070 461 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANXA1P04083 346 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CAPN1P07384 714 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 SNRPAP09012 282 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 C6orf222P0C671 652 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 HOXB6P17509 224 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 MYF6P23409 242 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CHKAP35790 457 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 RGS7P49802 495 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ST13P50502 369 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 HIRAP54198 1017 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRKAA2P54646 552 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 P2RX3P56373 397 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CABP4P57796 275 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 VAC14Q08AM6 782 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 COX10Q12887 443 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 NFATC3Q12968 1075 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PTK7Q13308 1070 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 TOP3AQ13472 1001 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms