RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 SLC6A4P31645 630 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 CLCN1P35523 988 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 SNX16P57768 344 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 RPL6Q02878 288 aaKnown RBP19.14■□□□□ 0.65
GPC1-205ENST00000427506 KCNMA1Q12791 1236 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 DRAP1Q14919 205 aaPredicted RBP19.14■□□□□ 0.65
GPC1-205ENST00000427506 DCAF6Q58WW2 860 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 FAM133BQ5BKY9 247 aaKnown RBP19.14■□□□□ 0.65
GPC1-205ENST00000427506 EFHC1Q5JVL4 640 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 TMEM215Q68D42 235 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 SERPINA13PQ6UXR4 307 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 CCDC117Q8IWD4 279 aaPredicted RBP19.14■□□□□ 0.65
GPC1-205ENST00000427506 C1orf131Q8NDD1 294 aaKnown RBP19.14■□□□□ 0.65
GPC1-205ENST00000427506 MRGPRX1Q96LB2 322 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 LSM14BQ9BX40 385 aaKnown RBP19.14■□□□□ 0.65
GPC1-205ENST00000427506 SLC6A17Q9H1V8 727 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 SYNCQ9H7C4 482 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 CD248Q9HCU0 757 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 RXFP3Q9NSD7 469 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 TAB2Q9NYJ8 693 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 GGA2Q9UJY4 613 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 PLA2G4CQ9UP65 541 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 SPAG17Q6Q759 2223 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 KHNYNO15037 678 aaKnown RBP19.13■□□□□ 0.65
GPC1-205ENST00000427506 TRUB2O95900 331 aaKnown RBP19.13■□□□□ 0.65
GPC1-205ENST00000427506 EPHX1P07099 455 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 PABPC1P11940 636 aaKnown RBP19.13■□□□□ 0.65
GPC1-205ENST00000427506 PTGER3P43115 390 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 TAF5Q15542 800 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 FUT11Q495W5 492 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 SPDYCQ5MJ68 293 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 MPP7Q5T2T1 576 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 KLHDC7AQ5VTJ3 777 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 LYSMD4Q5XG99 296 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 NADSYN1Q6IA69 706 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 OR6B2Q6IFH4 312 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 MFN1Q8IWA4 741 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 FAM71AQ8IYT1 594 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 AHI1Q8N157 1196 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 DEFB119Q8N690 84 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 ZNF557Q8N988 423 aaPredicted RBP19.13■□□□□ 0.65
GPC1-205ENST00000427506 HJURPQ8NCD3 748 aaPredicted RBP19.13■□□□□ 0.65
GPC1-205ENST00000427506 SLC39A13Q96H72 371 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 VPS16Q9H269 839 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 FAM204AQ9H8W3 233 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 PRDM16Q9HAZ2 1276 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 PLCB1Q9NQ66 1216 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 FHOD1Q9Y613 1164 aa19.13■□□□□ 0.65
GPC1-205ENST00000427506 DMXL1Q9Y485 3027 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 SDK1Q7Z5N4 2213 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 SYNJ2BP-COX16A0A087WUM0 186 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 IGHV1OR15-9A0A0B4J2B8 117 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 MED19A0JLT2 244 aaPredicted RBP19.12■□□□□ 0.65
GPC1-205ENST00000427506 GRAP2O75791 330 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 GLI1P08151 1106 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 KCNA4P22459 653 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 LIMK1P53667 647 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 CDK17Q00537 523 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 ENPP2Q13822 863 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 FNDC3BQ53EP0 1204 aaKnown RBP19.12■□□□□ 0.65
GPC1-205ENST00000427506 ZC3H12AQ5D1E8 599 aaKnown RBP19.12■□□□□ 0.65
GPC1-205ENST00000427506 STPG1Q5TH74 334 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 RNF43Q68DV7 783 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 C11orf57Q6ZUT1 292 aaPredicted RBP19.12■□□□□ 0.65
GPC1-205ENST00000427506 DEFB106AQ8N104 65 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 CARNMT1Q8N4J0 409 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 CYB5D2Q8WUJ1 264 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 RNF34Q969K3 372 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 EDEM2Q9BV94 578 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 COX16Q9P0S2 106 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 SLC12A6Q9UHW9 1150 aa19.12■□□□□ 0.65
GPC1-205ENST00000427506 MYO18AQ92614 2054 aaKnown RBP19.12■□□□□ 0.65
GPC1-205ENST00000427506 PATE3B3GLJ2 98 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 HSF2BPO75031 334 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 NDUFS2O75306 463 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 ATP5BP06576 529 aaKnown RBP19.11■□□□□ 0.65
GPC1-205ENST00000427506 UCHL3P15374 230 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 POLR2EP19388 210 aaKnown RBP19.11■□□□□ 0.65
GPC1-205ENST00000427506 PRKCHP24723 683 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 CD70P32970 193 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 RPS24P62847 133 aaKnown RBP19.11■□□□□ 0.65
GPC1-205ENST00000427506 MS4A13Q5J8X5 152 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 FKBP15Q5T1M5 1219 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 MBLAC2Q68D91 279 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 DPY19L2P1Q6NXN4 242 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 RBM43Q6ZSC3 357 aaKnown RBP19.11■□□□□ 0.65
GPC1-205ENST00000427506 FAM183BPQ6ZVS7 135 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 CHSY1Q86X52 802 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 SYT12Q8IV01 421 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.11■□□□□ 0.65
GPC1-205ENST00000427506 ATP6V0D2Q8N8Y2 350 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 TMEM35BQ8NCS4 154 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 WFDC5Q8TCV5 224 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 PRICKLE1Q96MT3 831 aaPredicted RBP19.11■□□□□ 0.65
GPC1-205ENST00000427506 NUCKS1Q9H1E3 243 aaKnown RBP19.11■□□□□ 0.65
GPC1-205ENST00000427506 ANO10Q9NW15 660 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.11■□□□□ 0.65
GPC1-205ENST00000427506 ASNSD1Q9NWL6 643 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 THADAQ6YHU6 1953 aa19.11■□□□□ 0.65
GPC1-205ENST00000427506 CEP250Q9BV73 2442 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms