RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TAS2R40P59535 323 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 MS4A13Q5J8X5 152 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 CYP4V2Q6ZWL3 525 aaPredicted RBP15.96■□□□□ 0.15
COL11A1-204ENST00000427239 BBS7Q8IWZ6 715 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 FAM217AQ8IXS0 508 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 ADGRG2Q8IZP9 1017 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 OSCP1Q8WVF1 389 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 PEBP4Q96S96 227 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 TRMT61BQ9BVS5 477 aaKnown RBP15.96■□□□□ 0.15
COL11A1-204ENST00000427239 SIK2Q9H0K1 926 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 ANLNQ9NQW6 1124 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 DDX56Q9NY93 547 aaKnown RBP15.96■□□□□ 0.15
COL11A1-204ENST00000427239 AP4E1Q9UPM8 1137 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 NUMBLQ9Y6R0 609 aa15.96■□□□□ 0.15
COL11A1-204ENST00000427239 KCNA4P22459 653 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 NRG1Q02297 640 aaPredicted RBP15.95■□□□□ 0.14
COL11A1-204ENST00000427239 KCNT1Q5JUK3 1230 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 ZNF569Q5MCW4 686 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 CPNE8Q86YQ8 564 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 MAP7D3Q8IWC1 876 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 CPXM2Q8N436 756 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 RIN3Q8TB24 985 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 ASB2Q96Q27 587 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 KXD1Q9BQD3 176 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 SNRNP25Q9BV90 132 aaKnown RBP15.95■□□□□ 0.14
COL11A1-204ENST00000427239 PLA2G2FQ9BZM2 168 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 KCNK12Q9HB15 430 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 DUS2Q9NX74 493 aaKnown RBP15.95■□□□□ 0.14
COL11A1-204ENST00000427239 XPO7Q9UIA9 1087 aaKnown RBP15.95■□□□□ 0.14
COL11A1-204ENST00000427239 JRKLQ9Y4A0 524 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 PCDHA3Q9Y5H8 950 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 HS3ST4Q9Y661 456 aa15.95■□□□□ 0.14
COL11A1-204ENST00000427239 CHADO15335 359 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 FTCDO95954 541 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 L1CAMP32004 1257 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 HTR7P34969 479 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 CTNNA1P35221 906 aaKnown RBP15.94■□□□□ 0.14
COL11A1-204ENST00000427239 AUHQ13825 339 aaKnown RBP15.94■□□□□ 0.14
COL11A1-204ENST00000427239 PDK2Q15119 407 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 PDGFRLQ15198 375 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 DPYSL2Q16555 572 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 FAM133BQ5BKY9 247 aaKnown RBP15.94■□□□□ 0.14
COL11A1-204ENST00000427239 MEI1Q5TIA1 1274 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 LRRC31Q6UY01 552 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 ZSCAN30Q86W11 494 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 UBL4BQ8N7F7 174 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 KCTD6Q8NC69 237 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 PRMT1Q99873 361 aaKnown RBP15.94■□□□□ 0.14
COL11A1-204ENST00000427239 FAM83CQ9BQN1 747 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 LINC00597Q9H2U6 94 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 TMPRSS4Q9NRS4 437 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 NUP210Q8TEM1 1887 aaPredicted RBP15.94■□□□□ 0.14
COL11A1-204ENST00000427239 F5H5T6 163 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 BMP1P13497 986 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 TACR2P21452 398 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 CTNNA2P26232 953 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 IFNAR2P48551 515 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 SMTNL2Q2TAL5 461 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 ODF2Q5BJF6 829 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 ZFYVE27Q5T4F4 411 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 PIK3R6Q5UE93 754 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 TXNRD3NBQ6F5E7 133 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 NADSYN1Q6IA69 706 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 SLC44A3Q8N4M1 653 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 HSPH1Q92598 858 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 ATP2A3Q93084 1043 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 HES6Q96HZ4 224 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 EPAS1Q99814 870 aa15.94■□□□□ 0.14
COL11A1-204ENST00000427239 RPP25Q9BUL9 199 aaKnown RBP15.94■□□□□ 0.14
COL11A1-204ENST00000427239 DHX35Q9H5Z1 703 aaKnown RBP15.94■□□□□ 0.14
COL11A1-204ENST00000427239 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.94■□□□□ 0.14
COL11A1-204ENST00000427239 GOLGA6L7A0A1B0GV03 622 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 ZRANB2O95218 330 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL11A1-204ENST00000427239 TNNT1P13805 278 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 HCAR3P49019 387 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 PEX5P50542 639 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 GNG11P61952 73 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 ZP2Q05996 745 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 EML3Q32P44 896 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 GLIPR1L2Q4G1C9 344 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 ATP13A4Q4VNC1 1196 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 MPP7Q5T2T1 576 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 RAP1GAP2Q684P5 730 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 CHSY1Q86X52 802 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 KATNAL2Q8IYT4 538 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 C17orf53Q8N3J3 647 aaPredicted RBP15.93■□□□□ 0.14
COL11A1-204ENST00000427239 ST13P5Q8NFI4 369 aaPredicted RBP15.93■□□□□ 0.14
COL11A1-204ENST00000427239 FAM71BQ8TC56 605 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 TMA16Q96EY4 203 aaKnown RBP15.93■□□□□ 0.14
COL11A1-204ENST00000427239 RETREG1Q9H6L5 497 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 SPHK2Q9NRA0 654 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 WNT6Q9Y6F9 365 aa15.93■□□□□ 0.14
COL11A1-204ENST00000427239 SCAMP3O14828 347 aaKnown RBP15.92■□□□□ 0.14
COL11A1-204ENST00000427239 SRGAP2O75044 1071 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 NFATC1O95644 943 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 CYBBP04839 570 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 SLC6A4P31645 630 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 GJC1P36383 396 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 RWDD2BP57060 319 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 NR1H3Q13133 447 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms