RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 ARHGEF38Q9NXL2 777 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 NFS1Q9Y697 457 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 LCHNA4D1U4 455 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 F5H423 210 aaPredicted RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 FGF18O76093 207 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 ABLIM3O94929 683 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 LINC00271P0C7V0 271 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 SLC29A2Q14542 456 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 C10orf120Q5SQS8 335 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 RWDD4Q6NW29 188 aaKnown RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 ARL8AQ96BM9 186 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 HERC2P3Q9BVR0 1158 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 CEP41Q9BYV8 373 aa17.93■□□□□ 0.46
FN1-208ENST00000426059 CDC42EP4Q9H3Q1 356 aaKnown RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 TLR8Q9NR97 1041 aaKnown RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 AFF4Q9UHB7 1163 aaKnown RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 ZMYND8Q9ULU4 1186 aaPredicted RBP17.93■□□□□ 0.46
FN1-208ENST00000426059 BCLAF3A2AJT9 711 aaKnown RBP17.92■□□□□ 0.46
FN1-208ENST00000426059 BANF1O75531 89 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 VAV1P15498 845 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 NR2C2P49116 596 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 SLC45A4Q5BKX6 768 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 CEP85LQ5SZL2 805 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 FIBCD1Q8N539 461 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 BBOF1Q8ND07 529 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 CCNYQ8ND76 341 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 FCRL2Q96LA5 508 aaPredicted RBP17.92■□□□□ 0.46
FN1-208ENST00000426059 SERPINB11Q96P15 392 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 OLFM3Q96PB7 478 aa17.92■□□□□ 0.46
FN1-208ENST00000426059 PABPC3Q9H361 631 aaKnown RBP17.92■□□□□ 0.46
FN1-208ENST00000426059 RNF40O75150 1001 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 ACSL3O95573 720 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 CAV1Q03135 178 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 AP1B1Q10567 949 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 EPAS1Q99814 870 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 PCDHB12Q9Y5F1 795 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 TUFMP49411 452 aaKnown RBP17.91■□□□□ 0.46
FN1-208ENST00000426059 SLMAPQ14BN4 828 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 KYNUQ16719 465 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 SKIDA1Q1XH10 827 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 SPRED2Q7Z698 418 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 ARHGAP18Q8N392 663 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 KLHL23Q8NBE8 558 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 DEPDC1BQ8WUY9 529 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 PRCCQ92733 491 aaPredicted RBP17.91■□□□□ 0.46
FN1-208ENST00000426059 CELF6Q96J87 481 aaKnown RBP17.91■□□□□ 0.46
FN1-208ENST00000426059 C9orf72Q96LT7 481 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 CENPHQ9H3R5 247 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 PRDM12Q9H4Q4 367 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 MRPL17Q9NRX2 175 aaKnown RBP17.91■□□□□ 0.46
FN1-208ENST00000426059 VPS18Q9P253 973 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 FARP1Q9Y4F1 1045 aaPredicted RBP17.91■□□□□ 0.46
FN1-208ENST00000426059 SHROOM3Q8TF72 1996 aa17.91■□□□□ 0.46
FN1-208ENST00000426059 TEX28O15482 410 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 TMEM63AO94886 807 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 TBX4P57082 545 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 HTRA4P83105 476 aaPredicted RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 FASTKD3Q14CZ7 662 aaKnown RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 BRMS1LQ5PSV4 323 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 KCTD16Q68DU8 428 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 C14orf80Q86SX3 495 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 TFB1MQ8WVM0 346 aaKnown RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 ZNF512Q96ME7 567 aaPredicted RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 QKIQ96PU8 341 aaKnown RBP eCLIP17.9■□□□□ 0.462e-11■■□□□ 12.2
FN1-208ENST00000426059 RBM15Q96T37 977 aaKnown RBP eCLIP17.9■□□□□ 0.46
FN1-208ENST00000426059 FAM129AQ9BZQ8 928 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 MARCH2Q9P0N8 246 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 SEPT10Q9P0V9 454 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 HS3ST4Q9Y661 456 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 PLXNA4Q9HCM2 1894 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 KCNU1A8MYU2 1149 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 RIPK2O43353 540 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 TLR5O60602 858 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 ZNF844Q08AG5 666 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 PAFAH1B3Q15102 231 aaKnown RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 TTMPQ5BVD1 217 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 HEATR6Q6AI08 1181 aaKnown RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 MSANTD2Q6P1R3 559 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 CDKL3Q8IVW4 592 aaPredicted RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 ZCCHC9Q8N567 271 aaKnown RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 SH3GL2Q99962 352 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 ALG13Q9NP73 1137 aaKnown RBP17.9■□□□□ 0.46
FN1-208ENST00000426059 MED4Q9NPJ6 270 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 RAB6BQ9NRW1 208 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 CLIC5Q9NZA1 410 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 NEU3Q9UQ49 428 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 TLR6Q9Y2C9 796 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 YIPF1Q9Y548 306 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 MYO7AQ13402 2215 aa17.9■□□□□ 0.46
FN1-208ENST00000426059 SLC12A8A0AV02 714 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 PRRG1O14668 218 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 HMGA1P17096 107 aaKnown RBP17.89■□□□□ 0.45
FN1-208ENST00000426059 ACTN2P35609 894 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 XRCC4Q13426 336 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 PPP2R5DQ14738 602 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 MORF4L2Q15014 288 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 PIK3R6Q5UE93 754 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 DENND2CQ68D51 928 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 PPIL6Q8IXY8 311 aa17.89■□□□□ 0.45
FN1-208ENST00000426059 GOLGA6L1Q8N7Z2 621 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms