RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 MAP3K6O95382 1288 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 LINC00271P0C7V0 271 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 HOXC13P31276 330 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 NRLP54845 237 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 NRG1Q02297 640 aaPredicted RBP15.7■□□□□ 0.1
ACTB-204ENST00000425660 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.1
ACTB-204ENST00000425660 C4orf22Q6V702 233 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 ZNF276Q8N554 614 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 GOLGA6L1Q8N7Z2 621 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 RNF34Q969K3 372 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 ZBTB9Q96C00 473 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 OLA1Q9NTK5 396 aaKnown RBP15.7■□□□□ 0.1
ACTB-204ENST00000425660 MYO16Q9Y6X6 1858 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 C5orf60A6NFR6 353 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 MSI1O43347 362 aaKnown RBP15.69■□□□□ 0.1
ACTB-204ENST00000425660 GCATO75600 419 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 ZNF189O75820 626 aaPredicted RBP15.69■□□□□ 0.1
ACTB-204ENST00000425660 ACTN2P35609 894 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 CBLBQ13191 982 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 SLC29A2Q14542 456 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 PDK1Q15118 436 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 PRKD1Q15139 912 aaPredicted RBP15.69■□□□□ 0.1
ACTB-204ENST00000425660 ARTNQ5T4W7 220 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 MANEALQ5VSG8 457 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 DENND2CQ68D51 928 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 B4GALNT4Q76KP1 1039 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 CCDC25Q86WR0 208 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 TFB1MQ8WVM0 346 aaKnown RBP15.69■□□□□ 0.1
ACTB-204ENST00000425660 PWWP2AQ96N64 755 aa15.69■□□□□ 0.1
ACTB-204ENST00000425660 RBM15Q96T37 977 aaKnown RBP eCLIP15.69■□□□□ 0.11e-12■□□□□ 11.1
ACTB-204ENST00000425660 UBE2OQ9C0C9 1292 aaKnown RBP15.69■□□□□ 0.1
ACTB-204ENST00000425660 SLC38A8A6NNN8 435 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 C2CD2LO14523 706 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 NCAM2O15394 837 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 TTC4O95801 387 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 FGBP02675 491 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 SLC2A3P11169 496 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 MAGEA6P43360 314 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 RAB33AQ14088 237 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 CEP85LQ5SZL2 805 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 RASIP1Q5U651 963 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 SNX30Q5VWJ9 437 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 PDZD4Q76G19 769 aaPredicted RBP15.68■□□□□ 0.1
ACTB-204ENST00000425660 OR2W6PQ8NHA6 318 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 OVCA2Q8WZ82 227 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 ABHD8Q96I13 439 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 C1orf74Q96LT6 269 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 NUDT5Q9UKK9 219 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 GREB1Q4ZG55 1949 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 PPP1R12AO14974 1030 aaPredicted RBP15.68■□□□□ 0.1
ACTB-204ENST00000425660 CHADO15335 359 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 PAGE1O75459 146 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 URODP06132 367 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 EPHB2P29323 1055 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 FPGSQ05932 587 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 TTMPQ5BVD1 217 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 UBAP2Q5T6F2 1119 aaKnown RBP15.68■□□□□ 0.1
ACTB-204ENST00000425660 ANKRD22Q5VYY1 191 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 HEATR6Q6AI08 1181 aaKnown RBP15.68■□□□□ 0.1
ACTB-204ENST00000425660 HTR3CQ8WXA8 447 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 CLP1Q92989 425 aaKnown RBP15.68■□□□□ 0.1
ACTB-204ENST00000425660 ARL8AQ96BM9 186 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 FCRL2Q96LA5 508 aaPredicted RBP15.68■□□□□ 0.1
ACTB-204ENST00000425660 TMEM109Q9BVC6 243 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 PRKAG2Q9UGJ0 569 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 MAFFQ9ULX9 164 aa15.68■□□□□ 0.1
ACTB-204ENST00000425660 PTPRSQ13332 1948 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 CCDC85CA6NKD9 419 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 E7ESA3 106 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 LILRB3O75022 631 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 TMEM63AO94886 807 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 SEC24AO95486 1093 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 IGLV3-27P01718 113 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 SHBGP04278 402 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 MYZAPP0CAP1 466 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 VAV1P15498 845 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 SERPINB6P35237 376 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 KCNJ11Q14654 390 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 VPS52Q8N1B4 723 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 NPWQ8N729 165 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 GIPC2Q8TF65 315 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 BADQ92934 168 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 MYRFLQ96LU7 910 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 LGMNQ99538 433 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 BRD8Q9H0E9 1235 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 TMBIM4Q9HC24 238 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.67■□□□□ 0.1
ACTB-204ENST00000425660 FNIP2Q9P278 1114 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 PCDHB12Q9Y5F1 795 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 SNX10Q9Y5X0 201 aa15.67■□□□□ 0.1
ACTB-204ENST00000425660 ALOX15BO15296 676 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 POLR3GO15318 223 aaPredicted RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 FGF10O15520 208 aaPredicted RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 MAGEA4P43358 317 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 MLLT6P55198 1093 aaPredicted RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 BASP1P80723 227 aaKnown RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 RING1Q06587 406 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 TRIP4Q15650 581 aaPredicted RBP15.66■□□□□ 0.1
ACTB-204ENST00000425660 HIF1AQ16665 826 aa15.66■□□□□ 0.1
ACTB-204ENST00000425660 CENPUQ71F23 418 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms