RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 COILP38432 576 aaPredicted RBP16.22■□□□□ 0.19
SHOX2-202ENST00000425436 SSR1P43307 286 aaKnown RBP16.22■□□□□ 0.19
SHOX2-202ENST00000425436 PSEN1P49768 467 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 HLTFQ14527 1009 aaKnown RBP eCLIP16.22■□□□□ 0.19
SHOX2-202ENST00000425436 CCDC137Q6PK04 289 aaKnown RBP16.22■□□□□ 0.19
SHOX2-202ENST00000425436 ZDHHC17Q8IUH5 632 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 SCML4Q8N228 414 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 ARHGAP18Q8N392 663 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 ADAMTS19Q8TE59 1207 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 IRGQQ8WZA9 623 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 USP13Q92995 863 aaPredicted RBP16.22■□□□□ 0.19
SHOX2-202ENST00000425436 FAM149B1Q96BN6 582 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 RSPRY1Q96DX4 576 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 MCEEQ96PE7 176 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 PLA2G2FQ9BZM2 168 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 TRIM7Q9C029 511 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 NACA2Q9H009 215 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 SMPD4Q9NXE4 827 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 NUMBLQ9Y6R0 609 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 C19orf67A6NJJ6 358 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 GOLGA8SH3BPF8 625 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 LTFP02788 710 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 FYNP06241 537 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 RARAP10276 462 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 MBL2P11226 248 aaPredicted RBP16.21■□□□□ 0.19
SHOX2-202ENST00000425436 RALAP11233 206 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 FCARP24071 287 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 RPL7AP62424 266 aaKnown RBP16.21■□□□□ 0.19
SHOX2-202ENST00000425436 ZXDBP98169 803 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 SLC6A3Q01959 620 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 LMNB2Q03252 620 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 SPDYCQ5MJ68 293 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 C10orf120Q5SQS8 335 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 DUPD1Q68J44 220 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 XYLT1Q86Y38 959 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 JAMLQ86YT9 394 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 CCDC105Q8IYK2 499 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 LRRC3BQ96PB8 259 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 RUFY1Q96T51 708 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 KCNK12Q9HB15 430 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 ZFP14Q9HCL3 533 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 GKN1Q9NS71 199 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 TDP1Q9NUW8 608 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 CLIC5Q9NZA1 410 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 NAALADL1Q9UQQ1 740 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 EFR3BQ9Y2G0 817 aa16.21■□□□□ 0.19
SHOX2-202ENST00000425436 NUP210Q8TEM1 1887 aaPredicted RBP16.21■□□□□ 0.19
SHOX2-202ENST00000425436 TRIOO75962 3097 aa16.21■□□□□ 0.18
SHOX2-202ENST00000425436 SOBPA7XYQ1 873 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 ANHXE9PGG2 379 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 SLC34A2O95436 690 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 NCAM1P13591 858 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 OAS2P29728 719 aaKnown RBP16.2■□□□□ 0.18
SHOX2-202ENST00000425436 PTPN7P35236 360 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 ATP5C1P36542 298 aaKnown RBP16.2■□□□□ 0.18
SHOX2-202ENST00000425436 EFEMP1Q12805 493 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 HTR4Q13639 388 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 SYPL2Q5VXT5 272 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 OLFML1Q6UWY5 402 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 ADAT2Q7Z6V5 191 aaKnown RBP16.2■□□□□ 0.18
SHOX2-202ENST00000425436 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 CCDC50Q8IVM0 306 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 GSPT2Q8IYD1 628 aaKnown RBP16.2■□□□□ 0.18
SHOX2-202ENST00000425436 GJD3Q8N144 294 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 KHSRPQ92945 711 aaKnown RBP eCLIP16.2■□□□□ 0.18
SHOX2-202ENST00000425436 HINFPQ9BQA5 517 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 ABCC13Q9NSE7 274 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 ASNSD1Q9NWL6 643 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 SFMBT1Q9UHJ3 866 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 CPQQ9Y646 472 aa16.2■□□□□ 0.18
SHOX2-202ENST00000425436 ESYT3A0FGR9 886 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 HEPACAM2A8MVW5 462 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 DPYSL4O14531 572 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 RNF8O76064 485 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 TJP3O95049 919 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 GJB6O95452 261 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 ECEL1O95672 775 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 OLFM2O95897 454 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 PSMA2P25787 234 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 HSPA9P38646 679 aaKnown RBP16.19■□□□□ 0.18
SHOX2-202ENST00000425436 PTGIRP43119 386 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 TUBP50607 506 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 YWHAZP63104 245 aaKnown RBP16.19■□□□□ 0.18
SHOX2-202ENST00000425436 SIX1Q15475 284 aaPredicted RBP16.19■□□□□ 0.18
SHOX2-202ENST00000425436 CCNG2Q16589 344 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 EFHC1Q5JVL4 640 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 FAM102AQ5T9C2 384 aaPredicted RBP16.19■□□□□ 0.18
SHOX2-202ENST00000425436 AADACL2Q6P093 401 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 MTSS1LQ765P7 747 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 ATL2Q8NHH9 583 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 RIN3Q8TB24 985 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 RNF139Q8WU17 664 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 FRMD8P1Q9BZ68 369 aaPredicted RBP16.19■□□□□ 0.18
SHOX2-202ENST00000425436 OSBPL8Q9BZF1 889 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 TRPV4Q9HBA0 871 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 ZMYM5Q9UJ78 669 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 DNMT3LQ9UJW3 386 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 HELZP42694 1942 aaKnown RBP16.19■□□□□ 0.18
SHOX2-202ENST00000425436 CAPN9O14815 690 aa16.19■□□□□ 0.18
SHOX2-202ENST00000425436 SCAMP3O14828 347 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms