RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 BDNFP23560 247 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 ABCG1P45844 678 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 PCBP1Q15365 356 aaKnown RBP eCLIP11.92□□□□□ -0.5
UBR4-207ENST00000425413 TTC39BQ5VTQ0 682 aaPredicted RBP11.92□□□□□ -0.5
UBR4-207ENST00000425413 FYB2Q5VWT5 728 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 RNF43Q68DV7 783 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 ZMIZ2Q8NF64 920 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 CELF6Q96J87 481 aaKnown RBP11.92□□□□□ -0.5
UBR4-207ENST00000425413 TMEM209Q96SK2 561 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 NPY6RQ99463 290 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 TSSK1BQ9BXA7 367 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 PHACTR1Q9C0D0 580 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 UBP1Q9NZI7 540 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 A0A0A0MRY4 1105 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 ERCC2P18074 760 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 MAP2K2P36507 400 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 NR2C2P49116 596 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 RASA2Q15283 850 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 TAF2Q6P1X5 1199 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 RFX8Q6ZV50 586 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 NLRP9Q7RTR0 991 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 NDUFAF2Q8N183 169 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 ZNF276Q8N554 614 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 C10orf82Q8WW14 230 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 STAMBPL1Q96FJ0 436 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 SPATA13Q96N96 652 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 SIK2Q9H0K1 926 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 KLHL8Q9P2G9 620 aaPredicted RBP11.92□□□□□ -0.5
UBR4-207ENST00000425413 TRPV2Q9Y5S1 764 aa11.92□□□□□ -0.5
UBR4-207ENST00000425413 MGEA5O60502 916 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 DGKIO75912 1065 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 SRGAP2BP0DMP2 458 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 LRPAP1P30533 357 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 ALDH3A1P30838 453 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 SERPINB4P48594 390 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 NUMBP49757 651 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 PPP2R5DQ14738 602 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 TAF1BQ53T94 588 aaPredicted RBP11.91□□□□□ -0.5
UBR4-207ENST00000425413 C16orf46Q6P387 395 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 ZCCHC23Q6ZST2 131 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 ZNF567Q8N184 647 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 GSDMBQ8TAX9 411 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 PRR11Q96HE9 360 aaPredicted RBP11.91□□□□□ -0.5
UBR4-207ENST00000425413 NCAPGQ9BPX3 1015 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 DNAI2Q9GZS0 605 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 NOD2Q9HC29 1040 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 FBXO6Q9NRD1 293 aaPredicted RBP11.91□□□□□ -0.5
UBR4-207ENST00000425413 FETUBQ9UGM5 382 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 GTF2IRD1Q9UHL9 959 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 L3MBTL1Q9Y468 752 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 GABRDO14764 452 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 TM9SF1O15321 606 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 ATP6V1G2O95670 118 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 TROVE2P10155 538 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBR4-207ENST00000425413 ADRA1BP35368 520 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 DAOAP59103 153 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 TPI1P60174 286 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 LIMS2Q7Z4I7 341 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 GBP7Q8N8V2 638 aaPredicted RBP11.91□□□□□ -0.5
UBR4-207ENST00000425413 TRIB2Q92519 343 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 OLFM3Q96PB7 478 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 PLCD4Q9BRC7 762 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 MTG1Q9BT17 334 aaPredicted RBP11.91□□□□□ -0.5
UBR4-207ENST00000425413 PSAT1Q9Y617 370 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 SPAG6O75602 509 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 ITGB1P05556 798 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 ERVK-10P10266 1014 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 RPL34P49207 117 aaKnown RBP11.91□□□□□ -0.5
UBR4-207ENST00000425413 NEK3P51956 506 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 SLC18A1P54219 525 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 ZBTB16Q05516 673 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 NPWQ8N729 165 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 OR52K1Q8NGK4 314 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 SCAMP5Q8TAC9 235 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 USP33Q8TEY7 942 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 MYLPFQ96A32 169 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 ALKBH8Q96BT7 664 aaKnown RBP11.91□□□□□ -0.5
UBR4-207ENST00000425413 LBHD1Q9BQE6 289 aaPredicted RBP11.91□□□□□ -0.5
UBR4-207ENST00000425413 SYBUQ9NX95 663 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 KANSL3Q9P2N6 904 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 PADI3Q9ULW8 664 aa11.91□□□□□ -0.5
UBR4-207ENST00000425413 SCN4AP35499 1836 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 HMX2A2RU54 273 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.5
UBR4-207ENST00000425413 DUSP11O75319 330 aaKnown RBP11.9□□□□□ -0.5
UBR4-207ENST00000425413 RFPL1O75677 317 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 STK10O94804 968 aaKnown RBP11.9□□□□□ -0.5
UBR4-207ENST00000425413 RPSAP08865 295 aaKnown RBP11.9□□□□□ -0.5
UBR4-207ENST00000425413 ETV4P43268 484 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 WASHC5Q12768 1159 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 SEMA5AQ13591 1074 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 RWDD4Q6NW29 188 aaKnown RBP11.9□□□□□ -0.5
UBR4-207ENST00000425413 SH2D5Q6ZV89 423 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 RSPH3Q86UC2 560 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 MCUQ8NE86 351 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 TMLHEQ9NVH6 421 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 HEY2Q9UBP5 337 aa11.9□□□□□ -0.5
UBR4-207ENST00000425413 MGRN1O60291 552 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms