RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 RAB6CQ9H0N0 254 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 CATSPERBQ9H7T0 1116 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 TRPC7Q9HCX4 862 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
MDC1-205ENST00000425072 DRG1Q9Y295 367 aaKnown RBP10.69□□□□□ -0.7
MDC1-205ENST00000425072 A0A1W2PRU2 124 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 C2orf78A6NCI8 922 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 PDE2AO00408 941 aaPredicted RBP10.68□□□□□ -0.7
MDC1-205ENST00000425072 APOL1O14791 398 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 CREB3O43889 395 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 OLFM2O95897 454 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 CKMP06732 381 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 TUBBP07437 444 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
MDC1-205ENST00000425072 KRT10P13645 584 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 TGM2P21980 687 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 WEE1P30291 646 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 CHRNA3P32297 505 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 AVPR1AP37288 418 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 TERF1P54274 439 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 HYAL1Q12794 435 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 TCEAL5Q5H9L2 206 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 GPR158Q5T848 1215 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 GRASPQ7Z6J2 395 aaPredicted RBP10.68□□□□□ -0.7
MDC1-205ENST00000425072 GPR149Q86SP6 731 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 LZTR1Q8N653 840 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 KIAA1958Q8N8K9 716 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 ARL14EPQ8N8R7 260 aaPredicted RBP10.68□□□□□ -0.7
MDC1-205ENST00000425072 ATL2Q8NHH9 583 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 TSC1Q92574 1164 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 P3H4Q92791 437 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 FAF2Q96CS3 445 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 CYP2S1Q96SQ9 504 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 FERMT1Q9BQL6 677 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 AP1M1Q9BXS5 423 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 SLC46A2Q9BY10 475 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 LRRC19Q9H756 370 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 GKN1Q9NS71 199 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 MTMR10Q9NXD2 777 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 CWC15Q9P013 229 aaKnown RBP10.68□□□□□ -0.7
MDC1-205ENST00000425072 LSM7Q9UK45 103 aaKnown RBP10.68□□□□□ -0.7
MDC1-205ENST00000425072 MRPS23Q9Y3D9 190 aaKnown RBP10.68□□□□□ -0.7
MDC1-205ENST00000425072 RAD54BQ9Y620 910 aa10.68□□□□□ -0.7
MDC1-205ENST00000425072 NCAM2O15394 837 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 FGF10O15520 208 aaPredicted RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 MSI1O43347 362 aaKnown RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 ACSL4O60488 711 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 HMBSP08397 361 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 CD48P09326 243 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 EPHB2P29323 1055 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 STIP1P31948 543 aaKnown RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 CHKAP35790 457 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 TPI1P60174 286 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 KLF1Q13351 362 aaPredicted RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 AUHQ13825 339 aaKnown RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 CYP1B1Q16678 543 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 CA9Q16790 459 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 ADGRF1Q5T601 910 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 ANKRD54Q6NXT1 300 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 AADACL2Q6P093 401 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 DRICH1Q6PGQ1 229 aaPredicted RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 TMC5Q6UXY8 1006 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 RFX8Q6ZV50 586 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 HTR3DQ70Z44 454 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 ADAT2Q7Z6V5 191 aaKnown RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 CMTM8Q8IZV2 173 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 SHKBP1Q8TBC3 707 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 GRK7Q8WTQ7 553 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 ZNF707Q96C28 371 aaPredicted RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 ACSF2Q96CM8 615 aaPredicted RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 HAUS1Q96CS2 278 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 CSPG4P5Q96PW8 444 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 KCTD15Q96SI1 283 aaPredicted RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 GAS2L1Q99501 681 aaPredicted RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 PRDM12Q9H4Q4 367 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 SLITRK6Q9H5Y7 841 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 KLHL11Q9NVR0 708 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 GPATCH2LQ9NWQ4 482 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 HCFC1R1Q9NWW0 138 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 PPARGC1AQ9UBK2 798 aaKnown RBP10.67□□□□□ -0.7
MDC1-205ENST00000425072 ARHGAP26Q9UNA1 814 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 SH3BP1Q9Y3L3 701 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 HS3ST4Q9Y661 456 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 CACNA1AO00555 2505 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 DOCK6Q96HP0 2047 aa10.67□□□□□ -0.7
MDC1-205ENST00000425072 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
MDC1-205ENST00000425072 LAMA2P24043 3122 aaKnown RBP10.66□□□□□ -0.7
MDC1-205ENST00000425072 E2F8A0AVK6 867 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 DRGXA6NNA5 263 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 F5H5T6 163 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 APOC4-APOC2K7ER74 178 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 PHF2O75151 1096 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 TADA3O75528 432 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 STC2O76061 302 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 MOCS2O96007 188 aaPredicted RBP10.66□□□□□ -0.7
MDC1-205ENST00000425072 APOC2P02655 101 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 GOT1P17174 413 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 IGFBP4P22692 258 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 AMPD1P23109 780 aa10.66□□□□□ -0.7
MDC1-205ENST00000425072 FSHRP23945 695 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms