RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
PTPRN-204ENST00000423636 MATKP42679 507 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 CPT1AP50416 773 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 GTF2A1P52655 376 aaPredicted RBP12.3□□□□□ -0.44
PTPRN-204ENST00000423636 TMPRSS15P98073 1019 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 PCGF5Q86SE9 256 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 RSPH3Q86UC2 560 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 ZNF567Q8N184 647 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 TTC9BQ8N6N2 239 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 MFSD3Q96ES6 412 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 DUSP16Q9BY84 665 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 VPS11Q9H270 941 aa12.3□□□□□ -0.44
PTPRN-204ENST00000423636 MBLAC1A4D2B0 266 aaPredicted RBP12.29□□□□□ -0.44
PTPRN-204ENST00000423636 ENDOD1O94919 500 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 JCHAINP01591 159 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 GATMP50440 423 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 CHI3L2Q15782 390 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 DDR2Q16832 855 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 SLC45A4Q5BKX6 768 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 ARID3BQ8IVW6 561 aaPredicted RBP12.29□□□□□ -0.44
PTPRN-204ENST00000423636 ABI2Q9NYB9 513 aaPredicted RBP12.29□□□□□ -0.44
PTPRN-204ENST00000423636 PACSIN3Q9UKS6 424 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 PPME1Q9Y570 386 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 SPEGQ15772 3267 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 HMX2A2RU54 273 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 AOC2O75106 756 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 GRK4P32298 578 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 RDXP35241 583 aaKnown RBP12.29□□□□□ -0.44
PTPRN-204ENST00000423636 CCR10P46092 362 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 SLC8A3P57103 927 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 HTRA3P83110 453 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 KCNA10Q16322 511 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 TAZQ16635 292 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 SV2CQ496J9 727 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 VWA5B1Q5TIE3 1220 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 PPP1R2P3Q6NXS1 205 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 SLC26A9Q7LBE3 791 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 NLRP9Q7RTR0 991 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 ZNF280BQ86YH2 543 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 RASAL3Q86YV0 1011 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 BANPQ8N9N5 519 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 FBXO27Q8NI29 283 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 MYLPFQ96A32 169 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 ZNF560Q96MR9 790 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 KDM4CQ9H3R0 1056 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 ZBTB24O43167 697 aaPredicted RBP12.29□□□□□ -0.44
PTPRN-204ENST00000423636 EDF1O60869 148 aaKnown RBP12.29□□□□□ -0.44
PTPRN-204ENST00000423636 CD4P01730 458 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 GLRBP48167 497 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 CRYBB1P53674 252 aaPredicted RBP12.29□□□□□ -0.44
PTPRN-204ENST00000423636 POU5F1BQ06416 359 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 ZNF460Q14592 562 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 PCSK7Q16549 785 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 SLC9A4Q6AI14 798 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 FAM35AQ86V20 835 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 LRRC52Q8N7C0 313 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 AGAP11Q8TF27 550 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 MZB1Q8WU39 189 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 TNIP3Q96KP6 325 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 TSSK1BQ9BXA7 367 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 TRPV6Q9H1D0 765 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 NOD2Q9HC29 1040 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 KANSL3Q9P2N6 904 aa12.29□□□□□ -0.44
PTPRN-204ENST00000423636 ZMYND8Q9ULU4 1186 aaPredicted RBP12.29□□□□□ -0.44
PTPRN-204ENST00000423636 BUD23O43709 281 aaKnown RBP12.28□□□□□ -0.44
PTPRN-204ENST00000423636 OAS1P00973 400 aaKnown RBP12.28□□□□□ -0.44
PTPRN-204ENST00000423636 ADAM17P78536 824 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 PDE1BQ01064 536 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 PDK2Q15119 407 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 SNCBQ16143 134 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 PDK4Q16654 411 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 CROCCP2Q86T23 111 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 OR10T2Q8NGX3 314 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 PPP1R14CQ8TAE6 165 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 SGSM3Q96HU1 749 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 SIGLEC10Q96LC7 697 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 OXCT2Q9BYC2 517 aaPredicted RBP12.28□□□□□ -0.44
PTPRN-204ENST00000423636 PLEKHA5Q9HAU0 1116 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 FZD10Q9ULW2 581 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 FNDC3AQ9Y2H6 1198 aaKnown RBP12.28□□□□□ -0.44
PTPRN-204ENST00000423636 RPS6KL1Q9Y6S9 549 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 GJB3O75712 270 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 ABHD2P08910 425 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 MYL2P10916 166 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 NQO1P15559 274 aaKnown RBP12.28□□□□□ -0.44
PTPRN-204ENST00000423636 TPI1P60174 286 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 MRPS6P82932 125 aaKnown RBP12.28□□□□□ -0.44
PTPRN-204ENST00000423636 KDSRQ06136 332 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 KLHL38Q2WGJ6 581 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 HSP90AA5PQ58FG0 334 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 RFWD3Q6PCD5 774 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 YTHDF3Q7Z739 585 aaKnown RBP12.28□□□□□ -0.44
PTPRN-204ENST00000423636 SPATS2Q86XZ4 545 aaKnown RBP12.28□□□□□ -0.44
PTPRN-204ENST00000423636 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 SLC44A1Q8WWI5 657 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 CHRAC1Q9NRG0 131 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 SLC12A4Q9UP95 1085 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 SLC27A5Q9Y2P5 690 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms