RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
RPUSD3-203ENST00000423108 OSBPL2Q9H1P3 480 aa13.09□□□□□ -0.31
RPUSD3-203ENST00000423108 LINC00597Q9H2U6 94 aa13.09□□□□□ -0.31
RPUSD3-203ENST00000423108 DHX35Q9H5Z1 703 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-203ENST00000423108 PCDH18Q9HCL0 1135 aa13.09□□□□□ -0.31
RPUSD3-203ENST00000423108 AP4E1Q9UPM8 1137 aa13.09□□□□□ -0.31
RPUSD3-203ENST00000423108 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 MIF4GDA9UHW6 222 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 GFRA2O00451 464 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 APOEP02649 317 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 KRT7P08729 469 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 PYGMP11217 842 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 DESP17661 470 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 KDELR1P24390 212 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 HARS2P49590 506 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 ZNF211Q13398 564 aaPredicted RBP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 LLGL1Q15334 1064 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 PAPD7Q5XG87 772 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 RAP1GAP2Q684P5 730 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 RFWD3Q6PCD5 774 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 PARM1Q6UWI2 310 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 MFSD7Q6UXD7 560 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 PSTKQ8IV42 348 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 BBS7Q8IWZ6 715 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 CELF5Q8N6W0 485 aaKnown RBP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 TSC1Q92574 1164 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 PSMB7Q99436 277 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 NAPGQ99747 312 aaPredicted RBP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 HERPUD2Q9BSE4 406 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 EPS15L1Q9UBC2 864 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 STOML2Q9UJZ1 356 aa13.08□□□□□ -0.32
RPUSD3-203ENST00000423108 E2F8A0AVK6 867 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 CCDC66A2RUB6 948 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 C2CD4DB7Z1M9 353 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 SRGAP2O75044 1071 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 KRT1P04264 644 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 TACR2P21452 398 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 CASQ1P31415 396 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 CXCR5P32302 372 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 IRAK1P51617 712 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 SGSHP51688 502 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 AIF1P55008 147 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 CDH6P55285 790 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 RWDD2BP57060 319 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 AMPD2Q01433 879 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 AUHQ13825 339 aaKnown RBP13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 DPYSL3Q14195 570 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 SMAD2Q15796 467 aaKnown RBP13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 DPYSL2Q16555 572 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 TAZQ16635 292 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 EFHC2Q5JST6 749 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 MANEALQ5VSG8 457 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 PTCRAQ6ISU1 281 aaPredicted RBP13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 FBXL22Q6P050 247 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 OTOP3Q7RTS5 596 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 FAM217AQ8IXS0 508 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 KCTD6Q8NC69 237 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 COG1Q8WTW3 980 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 FGF14Q92915 247 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 IGSF8Q969P0 613 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 C1orf74Q96LT6 269 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 DDX56Q9NY93 547 aaKnown RBP13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 OR12D3Q9UGF7 316 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 SLC12A6Q9UHW9 1150 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 NEU3Q9UQ49 428 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 SH3BP1Q9Y3L3 701 aa13.07□□□□□ -0.32
RPUSD3-203ENST00000423108 LRRD1A4D1F6 860 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 CTAGE9A4FU28 777 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 DRGXA6NNA5 263 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 ANHXE9PGG2 379 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 KCNK3O14649 394 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 ZNF185O15231 689 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 TSPAN3O60637 253 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 LRIG2O94898 1065 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 ZRANB2O95218 330 aaKnown RBP eCLIP13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 IL9P15248 144 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 CDKN2BP42772 138 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 SLC11A2P49281 568 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 VCPP55072 806 aaKnown RBP13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 NRG1Q02297 640 aaPredicted RBP13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 ADCY2Q08462 1091 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 PPP6R3Q5H9R7 873 aaPredicted RBP13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 ADGRF1Q5T601 910 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 VITQ6UXI7 678 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 SPOCD1Q6ZMY3 1216 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 CHSY1Q86X52 802 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 DDX42Q86XP3 938 aaKnown RBP eCLIP13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 LGI2Q8N0V4 545 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 UBL4BQ8N7F7 174 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 EXD1Q8NHP7 514 aa13.06□□□□□ -0.32
RPUSD3-203ENST00000423108 UBE2Q2Q8WVN8 375 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms