RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 BAG6P46379 1132 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 SLC1A6P48664 564 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 SERPINB9P50453 376 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 GRIK3Q13003 919 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 PEX6Q13608 980 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 STILQ15468 1287 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 TEDDM1Q5T9Z0 273 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 MTHFD1LQ6UB35 978 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 PACS1Q6VY07 963 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 C10orf107Q8IVU9 208 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 PPFIBP2Q8ND30 876 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 GSTCDQ8NEC7 633 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 PIWIL2Q8TC59 973 aaKnown RBP16.27■□□□□ 0.19
CDH1-202ENST00000422392 TFB1MQ8WVM0 346 aaKnown RBP16.27■□□□□ 0.19
CDH1-202ENST00000422392 ARNTL2Q8WYA1 636 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 C11orf84Q9BUA3 381 aaPredicted RBP16.27■□□□□ 0.19
CDH1-202ENST00000422392 PIDD1Q9HB75 910 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 SYBUQ9NX95 663 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 PPM1HQ9ULR3 514 aa16.27■□□□□ 0.19
CDH1-202ENST00000422392 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.19
CDH1-202ENST00000422392 EME2A4GXA9 379 aaPredicted RBP16.26■□□□□ 0.19
CDH1-202ENST00000422392 BIRC5O15392 142 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 MAP3K7O43318 606 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 GSTA2P09210 222 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 ERVK-10P10266 1014 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 SKIP12755 728 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 MLH1P40692 756 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 WASHC5Q12768 1159 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 TUBB3Q13509 450 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 PCLAFQ15004 111 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 RALGPS1Q5JS13 557 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
CDH1-202ENST00000422392 MAVSQ7Z434 540 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 IFNLR1Q8IU57 520 aaPredicted RBP16.26■□□□□ 0.19
CDH1-202ENST00000422392 ZNF212Q9UDV6 495 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 RGS17Q9UGC6 210 aaPredicted RBP16.26■□□□□ 0.19
CDH1-202ENST00000422392 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.26■□□□□ 0.19
CDH1-202ENST00000422392 ANPEPP15144 967 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 DESP17661 470 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 PSMB4P28070 264 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 PTPN9P43378 593 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 PDE1BQ01064 536 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 NIPAL4Q0D2K0 466 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 DPY19L2Q6NUT2 758 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 IRGCQ6NXR0 463 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 CMC1Q7Z7K0 106 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 FAM149B1Q96BN6 582 aa16.26■□□□□ 0.19
CDH1-202ENST00000422392 ZNF184Q99676 751 aaPredicted RBP16.26■□□□□ 0.19
CDH1-202ENST00000422392 DDX50Q9BQ39 737 aaKnown RBP16.26■□□□□ 0.19
CDH1-202ENST00000422392 A0A0A0MRY4 1105 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 ARHGAP42A6NI28 874 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 RNF103O00237 685 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 USP12O75317 370 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 CIB2O75838 187 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 STAU1O95793 577 aaKnown RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 PRKCGP05129 697 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 AKAP5P24588 427 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 CPOXP36551 454 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 ADCYAP1R1P41586 468 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 ABCG1P45844 678 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 POU5F1BQ06416 359 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 NET1Q7Z628 596 aaPredicted RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 WDR75Q8IWA0 830 aaKnown RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 EFCAB3Q8N7B9 438 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 CCNYQ8ND76 341 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 CENPIQ92674 756 aaPredicted RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 SPATA13Q96N96 652 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 TMEM216Q9P0N5 145 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 USP3Q9Y6I4 520 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 CREB3O43889 395 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 PLIN3O60664 434 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 ITGA2BP08514 1039 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 UBTFL6P0CB48 400 aaPredicted RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 NR2C2P49116 596 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 ACTR3P61158 418 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 THEMIS2Q5TEJ8 643 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 KYAT3Q6YP21 454 aaKnown RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 MARK2Q7KZI7 788 aaKnown RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 SLC26A9Q7LBE3 791 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 ARCQ7LC44 396 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 SLC2A14Q8TDB8 520 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 APBB2Q92870 758 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 P2RY11Q96G91 374 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 OLFM3Q96PB7 478 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 OXCT2Q9BYC2 517 aaPredicted RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 FAM49AQ9H0Q0 323 aaPredicted RBP16.25■□□□□ 0.19
CDH1-202ENST00000422392 CDHR5Q9HBB8 845 aa16.25■□□□□ 0.19
CDH1-202ENST00000422392 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 A0A088AWK7 358 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 DGKIO75912 1065 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 ALDH1A2O94788 518 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 HOXA11P31270 313 aaPredicted RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 GRM5P41594 1212 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 SARNPP82979 210 aaKnown RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 MARCH8Q5T0T0 291 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 TAPT1Q6NXT6 567 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 IZUMO2Q6UXV1 221 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 TIFABQ6ZNK6 161 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms