RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 KDM1BQ8NB78 822 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 TMEM35BQ8NCS4 154 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 CADM4Q8NFZ8 388 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 FIBINQ8TAL6 211 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 DQX1Q8TE96 717 aaKnown RBP8.98□□□□□ -0.97
MDC1-204ENST00000422266 NDRG1Q92597 394 aaKnown RBP8.98□□□□□ -0.97
MDC1-204ENST00000422266 PRCCQ92733 491 aaPredicted RBP8.98□□□□□ -0.97
MDC1-204ENST00000422266 SIPA1Q96FS4 1042 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 MRGPRX1Q96LB2 322 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 ZSWIM1Q9BR11 485 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 NAT10Q9H0A0 1025 aaKnown RBP8.98□□□□□ -0.97
MDC1-204ENST00000422266 PCED1AQ9H1Q7 454 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 PRDM16Q9HAZ2 1276 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 LMBRD1Q9NUN5 540 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 ANO10Q9NW15 660 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 CACNA2D2Q9NY47 1150 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 CALCOCO1Q9P1Z2 691 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 GGA2Q9UJY4 613 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 STAP1Q9ULZ2 295 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 SCML1Q9UN30 329 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 SDK1Q7Z5N4 2213 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 ZNF292O60281 2723 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 SPTBN4Q9H254 2564 aa8.98□□□□□ -0.97
MDC1-204ENST00000422266 CEP250Q9BV73 2442 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 IGHV1OR15-9A0A0B4J2B8 117 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 BECN2A8MW95 431 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 F5H5T6 163 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 PIK3R2O00459 728 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 TRIM24O15164 1050 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 PAPSS1O43252 624 aaPredicted RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 MSI1O43347 362 aaKnown RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 TSPAN3O60637 253 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 TBL1XO60907 577 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 RNASEH1O60930 286 aaKnown RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 LSM8O95777 96 aaKnown RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 TRUB2O95900 331 aaKnown RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 F9P00740 461 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 EPHX1P07099 455 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 SYPP08247 313 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 NDUFV2P19404 249 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 CD6P30203 668 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 HLA-FP30511 346 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 NNMTP40261 264 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 WASP42768 502 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 SULT2A1Q06520 285 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 ZNF33AQ06730 810 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 RAPGEF1Q13905 1077 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 ZNF234Q14588 700 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 FNDC3BQ53EP0 1204 aaKnown RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 DCAF6Q58WW2 860 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 RABGAP1LQ5R372 815 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 STPG1Q5TH74 334 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 PEAR1Q5VY43 1037 aaPredicted RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 DENND1BQ6P3S1 775 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 KIAA1324Q6UXG2 1013 aaKnown RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 RBM43Q6ZSC3 357 aaKnown RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 CHST9Q7L1S5 443 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 KIAA0907Q7Z7F0 614 aaPredicted RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 TMPRSS6Q8IU80 811 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 ZNF397Q8NF99 534 aaPredicted RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 CLEC4CQ8WTT0 213 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 RLN3Q8WXF3 142 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 PIGKQ92643 395 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 RNF34Q969K3 372 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 SLC39A13Q96H72 371 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 FCRL2Q96LA5 508 aaPredicted RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 EDEM2Q9BV94 578 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 NUP58Q9BVL2 599 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 STK33Q9BYT3 514 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 TMEM9BQ9NQ34 198 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 PLCB1Q9NQ66 1216 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 ABCB8Q9NUT2 735 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 KIAA1522Q9P206 1035 aaPredicted RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 TPX2Q9ULW0 747 aaKnown RBP8.97□□□□□ -0.97
MDC1-204ENST00000422266 NAALADL1Q9UQQ1 740 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 INVSQ9Y283 1065 aa8.97□□□□□ -0.97
MDC1-204ENST00000422266 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 KCNU1A8MYU2 1149 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 H0Y626 953 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 FOXN3O00409 490 aaPredicted RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 GABBR2O75899 941 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 SRPRAP08240 638 aaKnown RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 CCDC172P0C7W6 258 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 C7P10643 843 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 UCHL3P15374 230 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 BCKDHBP21953 392 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 CDH5P33151 784 aaPredicted RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 NOS2P35228 1153 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 IL12RB1P42701 662 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 SLC6A3Q01959 620 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 GFPT1Q06210 699 aaPredicted RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 CAMK2GQ13555 558 aaPredicted RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 DRAP1Q14919 205 aaPredicted RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 SF3A2Q15428 464 aaKnown RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 STX1AQ16623 288 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 FUT11Q495W5 492 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 TTC31Q49AM3 519 aaPredicted RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 FAM133BQ5BKY9 247 aaKnown RBP8.96□□□□□ -0.98
MDC1-204ENST00000422266 TRIM61Q5EBN2 209 aa8.96□□□□□ -0.98
MDC1-204ENST00000422266 MS4A13Q5J8X5 152 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms