RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 NDUFAF2Q8N183 169 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 BANPQ8N9N5 519 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 CENPIQ92674 756 aaPredicted RBP11.29□□□□□ -0.6
DDX56-203ENST00000421223 NCAPGQ9BPX3 1015 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 TRMT13Q9NUP7 481 aaKnown RBP11.29□□□□□ -0.6
DDX56-203ENST00000421223 SLC38A7Q9NVC3 462 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 GTF2IRD1Q9UHL9 959 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 HAO1Q9UJM8 370 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 ATP9BO43861 1147 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 MOCS2O96007 188 aaPredicted RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 APOEP02649 317 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 SNRPAP09012 282 aaKnown RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 EPHB2P29323 1055 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 SCAMP5Q8TAC9 235 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 SRPK1Q96SB4 655 aaKnown RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 FERMT1Q9BQL6 677 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 ZNF395Q9H8N7 513 aaPredicted RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 XPNPEP3Q9NQH7 507 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 A8MUI8 341 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 SMAPO00193 183 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 MGEA5O60502 916 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 EDF1O60869 148 aaKnown RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 OAS1P00973 400 aaKnown RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 TPH1P17752 444 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 ADRA1BP35368 520 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 NR2C2P49116 596 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 NCALDP61601 193 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 SARNPP82979 210 aaKnown RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 KCNA10Q16322 511 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 TTC39BQ5VTQ0 682 aaPredicted RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 RFX8Q6ZV50 586 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 RFWD2Q8NHY2 731 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 SOCS4Q8WXH5 440 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 MYLPFQ96A32 169 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 STAMBPL1Q96FJ0 436 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 QKIQ96PU8 341 aaKnown RBP eCLIP11.28□□□□□ -0.6
DDX56-203ENST00000421223 LBHD1Q9BQE6 289 aaPredicted RBP11.28□□□□□ -0.6
DDX56-203ENST00000421223 WDCPQ9H6R7 721 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 RXFP1Q9HBX9 757 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 NUP205Q92621 2012 aa11.28□□□□□ -0.6
DDX56-203ENST00000421223 A0A0A0MRY4 1105 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 CBX6O95503 412 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 LTFP02788 710 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 ITGB1P05556 798 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 FYNP06241 537 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 SAT1P21673 171 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 PRKCZQ05513 592 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 SNCBQ16143 134 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 LGSNQ5TDP6 509 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 SDHAF4Q5VUM1 108 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 C16orf46Q6P387 395 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 ZCCHC23Q6ZST2 131 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 ARMCX6Q7L4S7 300 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 MTDHQ86UE4 582 aaKnown RBP11.27□□□□□ -0.6
DDX56-203ENST00000421223 ZMIZ2Q8NF64 920 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 PPP1R14CQ8TAE6 165 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 SIGLEC10Q96LC7 697 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 SPATA13Q96N96 652 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 NPY6RQ99463 290 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 EBNA1BP2Q99848 306 aaKnown RBP11.27□□□□□ -0.6
DDX56-203ENST00000421223 C11orf84Q9BUA3 381 aaPredicted RBP11.27□□□□□ -0.6
DDX56-203ENST00000421223 TSSK1BQ9BXA7 367 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 TKTL2Q9H0I9 626 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 TXNDC16Q9P2K2 825 aa11.27□□□□□ -0.6
DDX56-203ENST00000421223 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 GOLGA8TH3BQL2 631 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 DAB1O75553 588 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 GCATO75600 419 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 DNAJC8O75937 253 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 TROVE2P10155 538 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDX56-203ENST00000421223 ERVK-10P10266 1014 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 CCND3P30281 292 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 LRPAP1P30533 357 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 LHX1P48742 406 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 ARPP19P56211 112 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 DAOAP59103 153 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 ELF3P78545 371 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 TMPRSS15P98073 1019 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 PDE1BQ01064 536 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 XRCC4Q13426 336 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 XKR4Q5GH76 650 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 OTUD1Q5VV17 481 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 ZNF567Q8N184 647 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 OR52K1Q8NGK4 314 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 FAM124BQ9H5Z6 455 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 SLC12A4Q9UP95 1085 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 CHKBQ9Y259 395 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 PRG3Q9Y2Y8 225 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 USH1CQ9Y6N9 552 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 I6L893 689 aaPredicted RBP11.27□□□□□ -0.61
DDX56-203ENST00000421223 GPR182O15218 404 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 PDK1Q15118 436 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 ZNF534Q76KX8 674 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 METTL23Q86XA0 190 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 GSDMBQ8TAX9 411 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 MZB1Q8WU39 189 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms