RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 IGLV3-27P01718 113 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 SYPP08247 313 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 CSRP1P21291 193 aaKnown RBP22.19■■□□□ 1.14
PTPN4-202ENST00000420482 GPD2P43304 727 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 NNTQ13423 1086 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 FNDC3BQ53EP0 1204 aaKnown RBP22.19■■□□□ 1.14
PTPN4-202ENST00000420482 SMYD5Q6GMV2 418 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 GBP6Q6ZN66 633 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 TMPRSS6Q8IU80 811 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 SCUBE3Q8IX30 993 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 HDDC3Q8N4P3 179 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 DEFB119Q8N690 84 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 ZNF419Q96HQ0 510 aaPredicted RBP22.19■■□□□ 1.14
PTPN4-202ENST00000420482 MED15Q96RN5 788 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 SLC32A1Q9H598 525 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 ITM2CQ9NQX7 267 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 CLEC4EQ9ULY5 219 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 TLR6Q9Y2C9 796 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 CHD6Q8TD26 2715 aa22.19■■□□□ 1.14
PTPN4-202ENST00000420482 PI4KAP42356 2102 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 CEP192Q8TEP8 1941 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 THAP12O43422 761 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 ACSL4O60488 711 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 PABPC1P11940 636 aaKnown RBP22.18■■□□□ 1.14
PTPN4-202ENST00000420482 CEACAM1P13688 526 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 GNA15P30679 374 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 MAPK8P45983 427 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 SH3PXD2AQ5TCZ1 1133 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 TRIM65Q6PJ69 517 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 CHST9Q7L1S5 443 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 BEND5Q7L4P6 421 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 HJURPQ8NCD3 748 aaPredicted RBP22.18■■□□□ 1.14
PTPN4-202ENST00000420482 CLEC4CQ8WTT0 213 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 ZNF606Q8WXB4 792 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 SLC6A17Q9H1V8 727 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 FBRSQ9HAH7 460 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 ABCB8Q9NUT2 735 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 USP36Q9P275 1121 aaKnown RBP22.18■■□□□ 1.14
PTPN4-202ENST00000420482 GGA2Q9UJY4 613 aa22.18■■□□□ 1.14
PTPN4-202ENST00000420482 GTPBP10A4D1E9 387 aaKnown RBP22.17■■□□□ 1.14
PTPN4-202ENST00000420482 TBL1XO60907 577 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 POLR2EP19388 210 aaKnown RBP22.17■■□□□ 1.14
PTPN4-202ENST00000420482 HLA-FP30511 346 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 USP8P40818 1118 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 RPL34P49207 117 aaKnown RBP22.17■■□□□ 1.14
PTPN4-202ENST00000420482 EXOC3L4Q17RC7 722 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 PIK3R6Q5UE93 754 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 FAM114A1Q8IWE2 563 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.17■■□□□ 1.14
PTPN4-202ENST00000420482 CADM4Q8NFZ8 388 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 DQX1Q8TE96 717 aaKnown RBP22.17■■□□□ 1.14
PTPN4-202ENST00000420482 NUP58Q9BVL2 599 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 GTPBP2Q9BX10 602 aaKnown RBP22.17■■□□□ 1.14
PTPN4-202ENST00000420482 MKRN2Q9H000 416 aaKnown RBP22.17■■□□□ 1.14
PTPN4-202ENST00000420482 APEX2Q9UBZ4 518 aa22.17■■□□□ 1.14
PTPN4-202ENST00000420482 MEI4A8MW99 385 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 GABBR2O75899 941 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 APOEP02649 317 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 PRKCSHP14314 528 aaPredicted RBP22.16■■□□□ 1.14
PTPN4-202ENST00000420482 PRKCHP24723 683 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 MTIF2P46199 727 aaKnown RBP22.16■■□□□ 1.14
PTPN4-202ENST00000420482 TPMTP51580 245 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 SNX16P57768 344 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 SLC41A1Q8IVJ1 513 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 MFN1Q8IWA4 741 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 OR2T3Q8NH03 318 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 SORCS1Q8WY21 1168 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 TOE1Q96GM8 510 aaKnown RBP22.16■■□□□ 1.14
PTPN4-202ENST00000420482 NOX5Q96PH1 765 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 CRACR2AQ9BSW2 395 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 POPDC2Q9HBU9 364 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 WSB2Q9NYS7 404 aaPredicted RBP22.16■■□□□ 1.14
PTPN4-202ENST00000420482 DACH1Q9UI36 760 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 NFE2L3Q9Y4A8 694 aa22.16■■□□□ 1.14
PTPN4-202ENST00000420482 OPHN1O60890 802 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 CALCAP01258 141 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 DLDP09622 509 aaKnown RBP22.15■■□□□ 1.14
PTPN4-202ENST00000420482 ST8SIA6P61647 398 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 ARHGAP44Q17R89 818 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 PLEKHG6Q3KR16 790 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 TMEM215Q68D42 235 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 MBLAC2Q68D91 279 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 DENND1BQ6P3S1 775 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 RFWD3Q6PCD5 774 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 SLC4A5Q9BY07 1137 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 THAP9Q9H5L6 903 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 CAPN10Q9HC96 672 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 SUN2Q9UH99 717 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 SLC12A6Q9UHW9 1150 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 NAALADL1Q9UQQ1 740 aa22.15■■□□□ 1.14
PTPN4-202ENST00000420482 ASCC3Q8N3C0 2202 aaKnown RBP22.15■■□□□ 1.14
PTPN4-202ENST00000420482 ARHGAP33O14559 1287 aa22.14■■□□□ 1.13
PTPN4-202ENST00000420482 YWHAZP63104 245 aaKnown RBP22.14■■□□□ 1.13
PTPN4-202ENST00000420482 PTK2Q05397 1052 aa22.14■■□□□ 1.13
PTPN4-202ENST00000420482 ZNF252P-AS1Q0IIN9 211 aa22.14■■□□□ 1.13
PTPN4-202ENST00000420482 CAMK2GQ13555 558 aaPredicted RBP22.14■■□□□ 1.13
PTPN4-202ENST00000420482 CDH18Q13634 790 aa22.14■■□□□ 1.13
PTPN4-202ENST00000420482 FAM133BQ5BKY9 247 aaKnown RBP22.14■■□□□ 1.13
PTPN4-202ENST00000420482 KIAA0907Q7Z7F0 614 aaPredicted RBP22.14■■□□□ 1.13
PTPN4-202ENST00000420482 TMEM110Q86TL2 294 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms