RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 SHKBP1Q8TBC3 707 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 MYEOVQ96EZ4 313 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 CCDC97Q96F63 343 aaPredicted RBP7.1□□□□□ -1.27
CPS1-202ENST00000417946 P2RY11Q96G91 374 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 TUBB2BQ9BVA1 445 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 OSBPL8Q9BZF1 889 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 RNF38Q9H0F5 515 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 TTYH1Q9H313 450 aaPredicted RBP7.1□□□□□ -1.27
CPS1-202ENST00000417946 FAM204AQ9H8W3 233 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 SLC28A3Q9HAS3 691 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 ABCC13Q9NSE7 274 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.1□□□□□ -1.27
CPS1-202ENST00000417946 HCFC1R1Q9NWW0 138 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 DDIT4Q9NX09 232 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 ARHGEF38Q9NXL2 777 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 RRN3Q9NYV6 651 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 STAP1Q9ULZ2 295 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 MAGED2Q9UNF1 606 aaPredicted RBP7.1□□□□□ -1.27
CPS1-202ENST00000417946 AP4E1Q9UPM8 1137 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 MFHAS1Q9Y4C4 1052 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 HCFC2Q9Y5Z7 792 aa7.1□□□□□ -1.27
CPS1-202ENST00000417946 NYNRINQ9P2P1 1898 aaKnown RBP7.1□□□□□ -1.27
CPS1-202ENST00000417946 CDH23Q9H251 3354 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 REV3LO60673 3130 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 SYNJ2BP-COX16A0A087WUM0 186 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 ZNF487B1APH4 448 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 GFRA2O00451 464 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 CCL16O15467 120 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 CTIFO43310 598 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 COCHO43405 550 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PRPSAP2O60256 369 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 TLR5O60602 858 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 RNF8O76064 485 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 KRT7P08729 469 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PECAM1P16284 738 aaPredicted RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 HOXA9P31269 272 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 HOXC13P31276 330 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 CA8P35219 290 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 SSR1P43307 286 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 ALDH1A3P47895 512 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 NRIP1P48552 1158 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 TUBP50607 506 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 IRAK1P51617 712 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 EPHB3P54753 998 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 WDR4P57081 412 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 NTHL1P78549 312 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 CYP4F8P98187 520 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 DEUP1Q05D60 604 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 HYAL1Q12794 435 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 EFEMP1Q12805 493 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 NME3Q13232 169 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PPP2R5DQ14738 602 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 TRIP4Q15650 581 aaPredicted RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 CYP1B1Q16678 543 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 BOLA3Q53S33 107 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PRSS36Q5K4E3 855 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 STXBP5Q5T5C0 1151 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PIK3R6Q5UE93 754 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 SLC9A4Q6AI14 798 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 NADSYN1Q6IA69 706 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 KLHDC10Q6PID8 442 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 CCDC149Q6ZUS6 474 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 BBS12Q6ZW61 710 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 BPHLQ86WA6 291 aaPredicted RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 VSIG1Q86XK7 387 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PSTKQ8IV42 348 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 RCOR2Q8IZ40 523 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 ARHGAP18Q8N392 663 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 MMGT1Q8N4V1 131 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PLD5Q8N7P1 536 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 C12orf50Q8NA57 414 aaPredicted RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 PDZD8Q8NEN9 1154 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 SPATA4Q8NEY3 305 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PCDH19Q8TAB3 1148 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 RIN3Q8TB24 985 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 HSPH1Q92598 858 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 MRPL38Q96DV4 380 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 TCEAL4Q96EI5 215 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 PRMT1Q99873 361 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 TRIM62Q9BVG3 475 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 KLF16Q9BXK1 252 aaPredicted RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 AP1M1Q9BXS5 423 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 KLC2Q9H0B6 622 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 TLR8Q9NR97 1041 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 ETNK2Q9NVF9 386 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 DDX56Q9NY93 547 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.09□□□□□ -1.27
CPS1-202ENST00000417946 CWC15Q9P013 229 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 MARCH2Q9P0N8 246 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 COX16Q9P0S2 106 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 DNMT3BQ9UBC3 853 aaKnown RBP7.09□□□□□ -1.27
CPS1-202ENST00000417946 ZNF212Q9UDV6 495 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 TLR6Q9Y2C9 796 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 ASB3Q9Y575 518 aa7.09□□□□□ -1.27
CPS1-202ENST00000417946 CAPN9O14815 690 aa7.08□□□□□ -1.28
CPS1-202ENST00000417946 DCLK1O15075 740 aa7.08□□□□□ -1.28
CPS1-202ENST00000417946 LINC01565O15544 149 aa7.08□□□□□ -1.28
CPS1-202ENST00000417946 PAGE1O75459 146 aa7.08□□□□□ -1.28
CPS1-202ENST00000417946 ZRANB2O95218 330 aaKnown RBP eCLIP7.08□□□□□ -1.28
CPS1-202ENST00000417946 SLU7O95391 586 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms