RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 UNC93AQ86WB7 457 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 FUKQ8N0W3 1084 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 CRYBG2Q8N1P7 616 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 GALNT15Q8N3T1 639 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 ZNF843Q8N446 348 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 UBR7Q8N806 425 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 SLC2A14Q8TDB8 520 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 RHBDD1Q8TEB9 315 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 TOE1Q96GM8 510 aaKnown RBP18.84■□□□□ 0.61
VCP-202ENST00000417448 TNIP3Q96KP6 325 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 KCNK16Q96T55 309 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 NAT10Q9H0A0 1025 aaKnown RBP18.84■□□□□ 0.61
VCP-202ENST00000417448 PRORYQ9H606 182 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 PCDHB4Q9Y5E5 795 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 RAI2Q9Y5P3 530 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 WASH3PC4AMC7 463 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 TRIM66O15016 1216 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 BEST1O76090 585 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 CER1O95813 267 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 ACO1P21399 889 aaKnown RBP18.83■□□□□ 0.6
VCP-202ENST00000417448 MATKP42679 507 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 COPB1P53618 953 aaKnown RBP18.83■□□□□ 0.6
VCP-202ENST00000417448 IFRD2Q12894 506 aaPredicted RBP18.83■□□□□ 0.6
VCP-202ENST00000417448 MAPRE1Q15691 268 aaKnown RBP18.83■□□□□ 0.6
VCP-202ENST00000417448 SMAD1Q15797 465 aaKnown RBP18.83■□□□□ 0.6
VCP-202ENST00000417448 ARHGAP44Q17R89 818 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 EXOC3L4Q17RC7 722 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 TRIM65Q6PJ69 517 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 KIAA1324Q6UXG2 1013 aaKnown RBP18.83■□□□□ 0.6
VCP-202ENST00000417448 FAM35AQ86V20 835 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 LUZP1Q86V48 1076 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 PDCD7Q8N8D1 485 aaKnown RBP18.83■□□□□ 0.6
VCP-202ENST00000417448 JAKMIP2Q96AA8 810 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 C8orf48Q96LL4 319 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 CDC6Q99741 560 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 MIR1-1HGQ9H1L0 117 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 SIX2Q9NPC8 291 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 WSB2Q9NYS7 404 aaPredicted RBP18.83■□□□□ 0.6
VCP-202ENST00000417448 EHD2Q9NZN4 543 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 SLCO1B1Q9Y6L6 691 aa18.83■□□□□ 0.6
VCP-202ENST00000417448 TP53BP1Q12888 1972 aaPredicted RBP18.82■□□□□ 0.6
VCP-202ENST00000417448 FLRT2O43155 660 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 ZBTB24O43167 697 aaPredicted RBP18.82■□□□□ 0.6
VCP-202ENST00000417448 AP1G2O75843 785 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 NCAM1P13591 858 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 ZNF18P17022 549 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 PTPRNQ16849 979 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 PREPLQ4J6C6 727 aaPredicted RBP18.82■□□□□ 0.6
VCP-202ENST00000417448 PPP1R26Q5T8A7 1209 aaPredicted RBP18.82■□□□□ 0.6
VCP-202ENST00000417448 GRAMD4Q6IC98 578 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 DPY19L2P1Q6NXN4 242 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 TMEM270Q6UE05 265 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 ZNF605Q86T29 641 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 CYFIP2Q96F07 1278 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 TMEM176AQ96HP8 235 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 SLITRK1Q96PX8 696 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 SMOQ99835 787 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 BPIFA3Q9BQP9 254 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 GPR174Q9BXC1 333 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 DNAJC17Q9NVM6 304 aaKnown RBP18.82■□□□□ 0.6
VCP-202ENST00000417448 LIMA1Q9UHB6 759 aaKnown RBP18.82■□□□□ 0.6
VCP-202ENST00000417448 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.82■□□□□ 0.6
VCP-202ENST00000417448 SH3BP1Q9Y3L3 701 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 PCDHGB2Q9Y5G2 931 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 NUMA1Q14980 2115 aa18.82■□□□□ 0.6
VCP-202ENST00000417448 PNMA6AP0CW24 399 aaPredicted RBP18.81■□□□□ 0.6
VCP-202ENST00000417448 CD19P15391 556 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 DCAF12L1Q5VU92 463 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 SDE2Q6IQ49 451 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 NUDT18Q6ZVK8 323 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 APTXQ7Z2E3 356 aaKnown RBP18.81■□□□□ 0.6
VCP-202ENST00000417448 ZMIZ2Q8NF64 920 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 C1orf216Q8TAB5 229 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 CCSER2Q9H7U1 834 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 ACP6Q9NPH0 428 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 KRT82Q9NSB4 513 aa18.81■□□□□ 0.6
VCP-202ENST00000417448 USP36Q9P275 1121 aaKnown RBP18.81■□□□□ 0.6
VCP-202ENST00000417448 CKAP5Q14008 2032 aa18.8■□□□□ 0.6
VCP-202ENST00000417448 SMTNL1A8MU46 457 aa18.8■□□□□ 0.6
VCP-202ENST00000417448 PLK4O00444 970 aa18.8■□□□□ 0.6
VCP-202ENST00000417448 BCAT2O15382 392 aaPredicted RBP18.8■□□□□ 0.6
VCP-202ENST00000417448 CACNG3O60359 315 aa18.8■□□□□ 0.6
VCP-202ENST00000417448 TBXAS1P24557 533 aaPredicted RBP18.8■□□□□ 0.6
VCP-202ENST00000417448 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
VCP-202ENST00000417448 RBBP8NLQ8NC74 664 aaPredicted RBP18.8■□□□□ 0.6
VCP-202ENST00000417448 TFAP2BQ92481 460 aa18.8■□□□□ 0.6
VCP-202ENST00000417448 MKRN2Q9H000 416 aaKnown RBP18.8■□□□□ 0.6
VCP-202ENST00000417448 MYLKQ15746 1914 aa18.8■□□□□ 0.6
VCP-202ENST00000417448 A0A1B0GVT2 93 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 BECN2A8MW95 431 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 NEDD8-MDP1E9PL57 170 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 TLX3O43711 291 aaPredicted RBP18.79■□□□□ 0.6
VCP-202ENST00000417448 GREM1O60565 184 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 IRF1P10914 325 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 KRT5P13647 590 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 USP8P40818 1118 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 FUT11Q495W5 492 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 CCDC157Q569K6 752 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 PCSK4Q6UW60 755 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 IL27RAQ6UWB1 636 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms