RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 VPS33AQ96AX1 596 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 NARS2Q96I59 477 aaKnown RBP12.32□□□□□ -0.44
UBR4-205ENST00000417040 AVENQ9NQS1 362 aaPredicted RBP12.32□□□□□ -0.44
UBR4-205ENST00000417040 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 MGAT4DA6NG13 374 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 FOXO6A8MYZ6 492 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 MSX2P35548 267 aaPredicted RBP12.32□□□□□ -0.44
UBR4-205ENST00000417040 ZNF284Q2VY69 593 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 RNFT2Q96EX2 444 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 SENP6Q9GZR1 1112 aaPredicted RBP12.32□□□□□ -0.44
UBR4-205ENST00000417040 POLR1BQ9H9Y6 1135 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 RNF19AQ9NV58 838 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 EHD3Q9NZN3 535 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 MAP10Q9P2G4 905 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 GZMAP12544 262 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 LRPAP1P30533 357 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 FBXO33Q7Z6M2 555 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 DHRSXQ8N5I4 330 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 CYP2W1Q8TAV3 490 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 BDH2Q9BUT1 245 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 SPATA16Q9BXB7 569 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 FAM192AQ9GZU8 254 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 EPS8L2Q9H6S3 715 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 WDR41Q9HAD4 459 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 A8MX80 341 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 MTSS1O43312 755 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 ALDH1A1P00352 501 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 AUHQ13825 339 aaKnown RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 SHROOM1Q2M3G4 852 aaPredicted RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 GPR107Q5VW38 600 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 KCNV1Q6PIU1 500 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 SPATA6LQ8N4H0 392 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 WDR36Q8NI36 951 aaKnown RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 ACER1Q8TDN7 264 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 TADA1Q96BN2 335 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 PPP1R2P1Q96PQ5 205 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 PNMA5Q96PV4 448 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 ARMC7Q9H6L4 198 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 PLA2G4CQ9UP65 541 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 HECW2Q9P2P5 1572 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 KANSL1LA0AUZ9 987 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 TMEM191CA6NGB0 347 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 SLCO1B7G3V0H7 640 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 UNC5CO95185 931 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 C6orf222P0C671 652 aaPredicted RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 CXCL8P10145 99 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 SRP54P61011 504 aaKnown RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 FOLH1Q04609 750 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 DCTN2Q13561 401 aaKnown RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 LPCAT4Q643R3 524 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 ARMCX6Q7L4S7 300 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 NET1Q7Z628 596 aaPredicted RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 TFAP2DQ7Z6R9 452 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 ADGRF2Q8IZF7 708 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 TSPAN14Q8NG11 270 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 MECRQ9BV79 373 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 DPY30Q9C005 99 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 SH3BP4Q9P0V3 963 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 TIMM13Q9Y5L4 95 aaPredicted RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 CYB561D2O14569 222 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 TNFRSF21O75509 655 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 NPY2RP49146 381 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 CDH8P55286 799 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 RRP1BQ14684 758 aaKnown RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 MFSD4BQ5TF39 518 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 RNF220Q5VTB9 566 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 SV2AQ7L0J3 742 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 SCUBE3Q8IX30 993 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 OLFM1Q99784 485 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 SAR1AQ9NR31 198 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 STARD13Q9Y3M8 1113 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 MED26O95402 600 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 HMGCRP04035 888 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 RBP1P09455 135 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 CYP2C9P11712 490 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 PGAM1P18669 254 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 GRIA3P42263 894 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 GRIK3Q13003 919 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 CDH18Q13634 790 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 Q4G0T1 1027 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 ABRAQ8N0Z2 381 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 PSMA8Q8TAA3 256 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 ITFG1Q8TB96 612 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 EPB41L1Q9H4G0 881 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 PRMT7Q9NVM4 692 aaPredicted RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 TNS3Q68CZ2 1445 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 AFF2P51816 1311 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 ASS1P00966 412 aaKnown RBP12.31□□□□□ -0.44
UBR4-205ENST00000417040 ERAP2Q6P179 960 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 CACTIN-AS1Q8N1I8 211 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 ATP6V0D2Q8N8Y2 350 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 TRPC4Q9UBN4 977 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 CRYL1Q9Y2S2 319 aa12.31□□□□□ -0.44
UBR4-205ENST00000417040 A2ML1A8K2U0 1454 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 RAD51BO15315 384 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 NOTUMQ6P988 496 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ANKRD27Q96NW4 1050 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ZCCHC11Q5TAX3 1644 aaKnown RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 GAKO14976 1311 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms