RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CHST9Q7L1S5 443 aa15.04■□□□□ -0
PAF1-202ENST00000416728 FAM124AQ86V42 546 aa15.04■□□□□ -0
PAF1-202ENST00000416728 NAXDQ8IW45 347 aa15.04■□□□□ -0
PAF1-202ENST00000416728 OR2T3Q8NH03 318 aa15.04■□□□□ -0
PAF1-202ENST00000416728 CYB5D2Q8WUJ1 264 aa15.04■□□□□ -0
PAF1-202ENST00000416728 ZCCHC14Q8WYQ9 949 aaKnown RBP15.04■□□□□ -0
PAF1-202ENST00000416728 TFAP2BQ92481 460 aa15.04■□□□□ -0
PAF1-202ENST00000416728 LHX5Q9H2C1 402 aa15.04■□□□□ -0
PAF1-202ENST00000416728 GGA2Q9UJY4 613 aa15.04■□□□□ -0
PAF1-202ENST00000416728 PCDHB4Q9Y5E5 795 aa15.04■□□□□ -0
PAF1-202ENST00000416728 M0QYV0 167 aa15.03■□□□□ -0
PAF1-202ENST00000416728 PABPC1P11940 636 aaKnown RBP15.03■□□□□ -0
PAF1-202ENST00000416728 SLC11A2P49281 568 aa15.03■□□□□ -0
PAF1-202ENST00000416728 CETN1Q12798 172 aa15.03■□□□□ -0
PAF1-202ENST00000416728 STILQ15468 1287 aa15.03■□□□□ -0
PAF1-202ENST00000416728 CCDC40Q4G0X9 1142 aa15.03■□□□□ -0
PAF1-202ENST00000416728 NUGGCQ68CJ6 796 aa15.03■□□□□ -0
PAF1-202ENST00000416728 UNC45BQ8IWX7 931 aa15.03■□□□□ -0
PAF1-202ENST00000416728 AHI1Q8N157 1196 aa15.03■□□□□ -0
PAF1-202ENST00000416728 PPM1KQ8N3J5 372 aa15.03■□□□□ -0
PAF1-202ENST00000416728 CHCHD4Q8N4Q1 142 aa15.03■□□□□ -0
PAF1-202ENST00000416728 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.03■□□□□ -0
PAF1-202ENST00000416728 ENGASEQ8NFI3 743 aa15.03■□□□□ -0
PAF1-202ENST00000416728 SLC35F5Q8WV83 523 aa15.03■□□□□ -0
PAF1-202ENST00000416728 IRGQQ8WZA9 623 aa15.03■□□□□ -0
PAF1-202ENST00000416728 GOLGA1Q92805 767 aa15.03■□□□□ -0
PAF1-202ENST00000416728 CEP63Q96MT8 703 aa15.03■□□□□ -0
PAF1-202ENST00000416728 PCED1AQ9H1Q7 454 aa15.03■□□□□ -0
PAF1-202ENST00000416728 TMEM245Q9H330 911 aa15.03■□□□□ -0
PAF1-202ENST00000416728 EIF2B4Q9UI10 523 aaKnown RBP15.03■□□□□ -0
PAF1-202ENST00000416728 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.03■□□□□ -0
PAF1-202ENST00000416728 FRYQ5TBA9 3013 aa15.03■□□□□ -0
PAF1-202ENST00000416728 CFAP47Q6ZTR5 3102 aa15.02■□□□□ -0
PAF1-202ENST00000416728 PIK3R2O00459 728 aa15.02■□□□□ -0
PAF1-202ENST00000416728 PMM2O15305 246 aa15.02■□□□□ -0
PAF1-202ENST00000416728 CER1O95813 267 aa15.02■□□□□ -0
PAF1-202ENST00000416728 LTFP02788 710 aa15.02■□□□□ -0
PAF1-202ENST00000416728 ATP5BP06576 529 aaKnown RBP15.02■□□□□ -0
PAF1-202ENST00000416728 DLDP09622 509 aaKnown RBP15.02■□□□□ -0
PAF1-202ENST00000416728 PPP1R2P41236 205 aa15.02■□□□□ -0
PAF1-202ENST00000416728 CNGA2Q16280 664 aa15.02■□□□□ -0
PAF1-202ENST00000416728 MPP7Q5T2T1 576 aa15.02■□□□□ -0
PAF1-202ENST00000416728 MBLAC2Q68D91 279 aa15.02■□□□□ -0
PAF1-202ENST00000416728 PMF1Q6P1K2 205 aa15.02■□□□□ -0
PAF1-202ENST00000416728 IL27RAQ6UWB1 636 aa15.02■□□□□ -0
PAF1-202ENST00000416728 RAB44Q7Z6P3 723 aaPredicted RBP15.02■□□□□ -0
PAF1-202ENST00000416728 ADIPOR2Q86V24 386 aa15.02■□□□□ -0
PAF1-202ENST00000416728 ZNF366Q8N895 744 aa15.02■□□□□ -0
PAF1-202ENST00000416728 ZNF557Q8N988 423 aaPredicted RBP15.02■□□□□ -0
PAF1-202ENST00000416728 SNX19Q92543 992 aa15.02■□□□□ -0
PAF1-202ENST00000416728 DHTKD1Q96HY7 919 aaPredicted RBP15.02■□□□□ -0
PAF1-202ENST00000416728 TIGD1Q96MW7 591 aa15.02■□□□□ -0
PAF1-202ENST00000416728 IRX2Q9BZI1 471 aaPredicted RBP15.02■□□□□ -0
PAF1-202ENST00000416728 GAREM1Q9H706 876 aa15.02■□□□□ -0
PAF1-202ENST00000416728 FBRSQ9HAH7 460 aa15.02■□□□□ -0
PAF1-202ENST00000416728 CEP192Q8TEP8 1941 aa15.02□□□□□ -0.01
PAF1-202ENST00000416728 PCNX2A6NKB5 2137 aa15.02□□□□□ -0.01
PAF1-202ENST00000416728 IRAK2O43187 625 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 TBL1XO60907 577 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 GABBR2O75899 941 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 IGLV3-27P01718 113 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 BRD2P25440 801 aaKnown RBP15.01□□□□□ -0.01
PAF1-202ENST00000416728 MATKP42679 507 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 SGSHP51688 502 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 TBX4P57082 545 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 ZBTB16Q05516 673 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 RING1Q06587 406 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 PTPRNQ16849 979 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 PIK3R6Q5UE93 754 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 ISM2Q6H9L7 571 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 RFWD3Q6PCD5 774 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 KIAA0907Q7Z7F0 614 aaPredicted RBP15.01□□□□□ -0.01
PAF1-202ENST00000416728 KAT5Q92993 513 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 HSFY1Q96LI6 401 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 ZSWIM1Q9BR11 485 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 IL21RQ9HBE5 538 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 RALYQ9UKM9 306 aaKnown RBP15.01□□□□□ -0.01
PAF1-202ENST00000416728 ADAMTS9Q9P2N4 1935 aa15.01□□□□□ -0.01
PAF1-202ENST00000416728 IGF2RP11717 2491 aa15□□□□□ -0.01
PAF1-202ENST00000416728 GOLGA6L7A0A1B0GV03 622 aa15□□□□□ -0.01
PAF1-202ENST00000416728 TYW5A2RUC4 315 aaKnown RBP15□□□□□ -0.01
PAF1-202ENST00000416728 FAM221BA6H8Z2 402 aa15□□□□□ -0.01
PAF1-202ENST00000416728 SRRM3A6NNA2 597 aaPredicted RBP15□□□□□ -0.01
PAF1-202ENST00000416728 RNF225M0QZC1 329 aaPredicted RBP15□□□□□ -0.01
PAF1-202ENST00000416728 P4HA2O15460 535 aa15□□□□□ -0.01
PAF1-202ENST00000416728 ACSL4O60488 711 aa15□□□□□ -0.01
PAF1-202ENST00000416728 FBXO21O94952 628 aa15□□□□□ -0.01
PAF1-202ENST00000416728 DNTTP04053 509 aa15□□□□□ -0.01
PAF1-202ENST00000416728 FTH1P19P0C7X4 201 aa15□□□□□ -0.01
PAF1-202ENST00000416728 ZNF883P0CG24 379 aa15□□□□□ -0.01
PAF1-202ENST00000416728 POLR2EP19388 210 aaKnown RBP15□□□□□ -0.01
PAF1-202ENST00000416728 ACSL1P33121 698 aa15□□□□□ -0.01
PAF1-202ENST00000416728 AFF3P51826 1226 aaKnown RBP15□□□□□ -0.01
PAF1-202ENST00000416728 FAM133BQ5BKY9 247 aaKnown RBP15□□□□□ -0.01
PAF1-202ENST00000416728 KLHL10Q6JEL2 608 aa15□□□□□ -0.01
PAF1-202ENST00000416728 MFN1Q8IWA4 741 aa15□□□□□ -0.01
PAF1-202ENST00000416728 WFDC5Q8TCV5 224 aa15□□□□□ -0.01
PAF1-202ENST00000416728 SETD7Q8WTS6 366 aaKnown RBP15□□□□□ -0.01
PAF1-202ENST00000416728 CLEC4CQ8WTT0 213 aa15□□□□□ -0.01
PAF1-202ENST00000416728 ADAMTS14Q8WXS8 1223 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms