RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 SLCO1B1Q9Y6L6 691 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 GOLGA4Q13439 2230 aaKnown RBP10.48□□□□□ -0.73
MDC1-202ENST00000416571 A0A087WV48 116 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 H0Y8X5 98 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 KCNK3O14649 394 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 MAPK13O15264 365 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 ZBED1O96006 694 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 ATP5BP06576 529 aaKnown RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 TRIM49P0CI25 452 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 TRIM49CP0CI26 452 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 PDIA4P13667 645 aaKnown RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 HLA-FP30511 346 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 TKTL1P51854 596 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 IL9RQ01113 521 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 PDE4CQ08493 712 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 SFSWAPQ12872 951 aaKnown RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 NUMA1Q14980 2115 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 PTPRNQ16849 979 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 KMT5BQ4FZB7 885 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 FOXD4L5Q5VV16 416 aaPredicted RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 RESP18Q5W5W9 173 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 TMEM215Q68D42 235 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 LAYNQ6UX15 382 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 PIGZQ86VD9 579 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 TMPRSS12Q86WS5 348 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 FMNL3Q8IVF7 1028 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 RBBP8NLQ8NC74 664 aaPredicted RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 PIP4K2CQ8TBX8 421 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 RNF139Q8WU17 664 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 FOXD4L4Q8WXT5 416 aaPredicted RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 CCDC47Q96A33 483 aaKnown RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 TMA16Q96EY4 203 aaKnown RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 UBL7Q96S82 380 aaPredicted RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 ACE2Q9BYF1 805 aaPredicted RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 KCTD10Q9H3F6 313 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 LRRC4Q9HBW1 653 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 APOBEC3GQ9HC16 384 aaKnown RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 ABCB8Q9NUT2 735 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 SUN2Q9UH99 717 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 SERTAD1Q9UHV2 236 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 GGA2Q9UJY4 613 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 TENM4Q6N022 2769 aa10.47□□□□□ -0.73
MDC1-202ENST00000416571 MUC22E2RYF6 1773 aaPredicted RBP10.47□□□□□ -0.73
MDC1-202ENST00000416571 FAM47DPA6NHR8 397 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 PLK4O00444 970 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 KLRC4O43908 158 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 RNASEH1O60930 286 aaKnown RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 DLDP09622 509 aaKnown RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 SLFN14P0C7P3 912 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 PABPC1P11940 636 aaKnown RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 JUPP14923 745 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 POLR2EP19388 210 aaKnown RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 ABCB4P21439 1286 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 NR2F2P24468 414 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 HOXD9P28356 352 aaPredicted RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 CTSKP43235 329 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 ST8SIA6P61647 398 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 RPS14P62263 151 aaKnown RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 C19orf57Q0VDD7 668 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 TRIP4Q15650 581 aaPredicted RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 C1orf220Q5T0J3 134 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 C6orf118Q5T5N4 469 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 MBLAC2Q68D91 279 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 ZNF776Q68DI1 518 aaPredicted RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 FAM217AQ8IXS0 508 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 FAM186BQ8IYM0 893 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 CRELD1Q96HD1 420 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 TMEM176AQ96HP8 235 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 IPO9Q96P70 1041 aaKnown RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 UBXN6Q9BZV1 441 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 TMEM245Q9H330 911 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 PRSS16Q9NQE7 514 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 HESX1Q9UBX0 185 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 PCDHA7Q9UN72 937 aa10.46□□□□□ -0.73
MDC1-202ENST00000416571 HBS1LQ9Y450 684 aaKnown RBP10.46□□□□□ -0.73
MDC1-202ENST00000416571 PLXNA2O75051 1894 aa10.46□□□□□ -0.74
MDC1-202ENST00000416571 SHROOM3Q8TF72 1996 aa10.46□□□□□ -0.74
MDC1-202ENST00000416571 HECTD1Q9ULT8 2610 aa10.46□□□□□ -0.74
MDC1-202ENST00000416571 CABIN1Q9Y6J0 2220 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 COL5A1P20908 1838 aaPredicted RBP10.45□□□□□ -0.74
MDC1-202ENST00000416571 A0A1B0GTQ1 180 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 TYW5A2RUC4 315 aaKnown RBP10.45□□□□□ -0.74
MDC1-202ENST00000416571 K7ELQ4 463 aaPredicted RBP10.45□□□□□ -0.74
MDC1-202ENST00000416571 RRP8O43159 456 aaKnown RBP10.45□□□□□ -0.74
MDC1-202ENST00000416571 LATS1O95835 1130 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 ITGAVP06756 1048 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 CDK4P11802 303 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 RPL13P26373 211 aaKnown RBP10.45□□□□□ -0.74
MDC1-202ENST00000416571 PSMC2P35998 433 aaKnown RBP10.45□□□□□ -0.74
MDC1-202ENST00000416571 RACK1P63244 317 aaKnown RBP10.45□□□□□ -0.74
MDC1-202ENST00000416571 PPP3CAQ08209 521 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 RAB41Q5JT25 222 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 ADGRF1Q5T601 910 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 KIAA0895LQ68EN5 471 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 KRT39Q6A163 491 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 GATAD2AQ86YP4 633 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 SIX6OS1Q8N1H7 587 aa10.45□□□□□ -0.74
MDC1-202ENST00000416571 ZNF557Q8N988 423 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms