RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SH3GL1Q99961 368 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 CADM1Q9BY67 442 aaKnown RBP13.21□□□□□ -0.3
SCN1B-202ENST00000415950 MUC3BQ9H195 1237 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 PNPOQ9NVS9 261 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 TAS2R1Q9NYW7 299 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 PRG3Q9Y2Y8 225 aaPredicted RBP13.21□□□□□ -0.3
SCN1B-202ENST00000415950 NFS1Q9Y697 457 aa13.21□□□□□ -0.3
SCN1B-202ENST00000415950 MROH7Q68CQ1 1323 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 VIL1P09327 827 aaKnown RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 EPHA3P29320 983 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ACSBG2Q5FVE4 666 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 GJC2Q5T442 439 aaPredicted RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 AMIGO2Q86SJ2 522 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 STX19Q8N4C7 294 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 OR6J1Q8NGC5 347 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 SEPT5Q99719 369 aaPredicted RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 TMEM165Q9HC07 324 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 SEPT3Q9UH03 358 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 TSPAN16Q9UKR8 245 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ITM2BQ9Y287 266 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 UMODL1Q5DID0 1318 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ATP6AP2A0A1C7CYW4 349 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ATP6AP2O75787 350 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 GJB1P08034 283 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 TRAF2Q12933 501 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 MPP3Q13368 585 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 MPP2Q14168 576 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 HPS6Q86YV9 775 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ALLCQ8N6M5 410 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 OMDQ99983 421 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 DCDC2Q9UHG0 476 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ACOT9Q9Y305 439 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 STX7O15400 261 aaKnown RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 TSC22D2O75157 780 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 FAM58BPP0C7Q3 252 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 FDX1P10109 184 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 EPB42P16452 691 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 RGS4P49798 205 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 NDST1P52848 882 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 GSCP56915 257 aaPredicted RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 TRIM25Q14258 630 aaKnown RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 PDK3Q15120 406 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 AARS2Q5JTZ9 985 aaKnown RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 AGAP9Q5VTM2 703 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 SLFN11Q7Z7L1 901 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 URGCPQ8TCY9 931 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 DNAJC1Q96KC8 554 aaKnown RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 FRMD8Q9BZ67 464 aaPredicted RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 CACNA2D2Q9NY47 1150 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 FAM198AQ9UFP1 575 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 NR2E3Q9Y5X4 410 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 AHCYL1O43865 530 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ARIH2O95376 493 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ZNF682O95780 498 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 HSPA13P48723 471 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 NCKAP1LP55160 1127 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ADARP55265 1226 aaKnown RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 NOMO3P69849 1222 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 MYBPC2Q14324 1141 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 PGM5Q15124 567 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 CEP78Q5JTW2 689 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 RBM44Q6ZP01 1051 aaKnown RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 MAP4K3Q8IVH8 894 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 RBBP8Q99708 897 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
SCN1B-202ENST00000415950 WDR55Q9H6Y2 383 aaPredicted RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
SCN1B-202ENST00000415950 ATRNO75882 1429 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 PTGES3LE9PB15 166 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 INPP4BO15327 924 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 ZC3H11AO75152 810 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCN1B-202ENST00000415950 TBX10O75333 385 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 CD48P09326 243 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 SYTL3Q4VX76 610 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 TBCELQ5QJ74 424 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 DNAJC14Q6Y2X3 702 aaPredicted RBP13.19□□□□□ -0.3
SCN1B-202ENST00000415950 LPAR1Q92633 364 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 PHACTR1Q9C0D0 580 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 VAV3Q9UKW4 847 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 TPP1O14773 563 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 ALOX15BO15296 676 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 TADA2AO75478 443 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 SERPINE1P05121 402 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 TMEM176AQ96HP8 235 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 ACSS3Q9H6R3 686 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 WDCPQ9H6R7 721 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 C17orf75Q9HAS0 396 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 PXMP2Q9NR77 195 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 DPYSL4O14531 572 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 PSMD3O43242 534 aa13.19□□□□□ -0.3
SCN1B-202ENST00000415950 PIGNO95427 931 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms