RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 SAR1AQ9NR31 198 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 GAKO14976 1311 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 SNPHO15079 494 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 TPST1O60507 370 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 CYP1A2P05177 515 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 TPBGLP0DKB5 382 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 IMPDH2P12268 514 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 GLRBP48167 497 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 NFYCQ13952 458 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 RRP1BQ14684 758 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 N4BP2L1Q5TBK1 243 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 ARMC3Q5W041 872 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 MFSD7Q6UXD7 560 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 KCNK18Q7Z418 384 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 TCP10LQ8TDR4 215 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 RMND5BQ96G75 393 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 OXNAD1Q96HP4 312 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 H2AFY2Q9P0M6 372 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 APOC4-APOC2K7ER74 178 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 EML1O00423 815 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 APOC2P02655 101 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 ZNF23P17027 643 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 CRABP2P29373 138 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 SOAT1P35610 550 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 ALDH5A1P51649 535 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 FKBP1CQ5VVH2 108 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 C19orf18Q8NEA5 215 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 GLT1D1Q96MS3 346 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 DDX4Q9NQI0 724 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 COPG2Q9UBF2 871 aa14.06□□□□□ -0.16
SMARCA4-202ENST00000413806 RIC1Q4ADV7 1423 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 ITGALP20701 1170 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 CDK7P50613 346 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 ZNF410Q86VK4 478 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 KYQ8NBH2 561 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 LENG1Q96BZ8 264 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 CEP44Q9C0F1 390 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 TMEM134Q9H6X4 195 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 ATXN10Q9UBB4 475 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 MBD2Q9UBB5 411 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 COMMD3-BMI1R4GMX3 469 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 E9PBE3 544 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 KLHL41O60662 606 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 NFIL3Q16649 462 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 PRCCQ92733 491 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 DMAP1Q9NPF5 467 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 RWDD3Q9Y3V2 267 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 CD151P48509 253 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 RAB27AP51159 221 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 HPCAP84074 193 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 ITGADQ13349 1161 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 RGS21Q2M5E4 152 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 LRRC55Q6ZSA7 311 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 TCF7L2Q9NQB0 619 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 CLCA2Q9UQC9 943 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 ZMYM2Q9UBW7 1377 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 UBDO15205 165 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 ASS1P00966 412 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 HMGCRP04035 888 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 MZF1P28698 734 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 APOBEC3HQ6NTF7 200 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 EMILIN2Q9BXX0 1053 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 PCYOX1Q9UHG3 505 aa14.05□□□□□ -0.16
SMARCA4-202ENST00000413806 UPP2O95045 317 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 CCT3P49368 545 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 ALDH7A1P49419 539 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 SLC6A3Q01959 620 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 FUT11Q495W5 492 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 LRRC38Q5VT99 294 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 SCARA3Q6AZY7 606 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 SLC27A1Q6PCB7 646 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 TSEN2Q8NCE0 465 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 QKIQ96PU8 341 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 SRPK1Q96SB4 655 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 SYT15Q9BQS2 421 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 ADGRE3Q9BY15 652 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 CLPBQ9H078 707 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 ACTL7BQ9Y614 415 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 LRG1P02750 347 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 ANXA11P50995 505 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 IFI35P80217 286 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 LZTR1Q8N653 840 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 REPS2Q8NFH8 660 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 PPP1R10Q96QC0 940 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 ZNF184Q99676 751 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 MRIQ9BWK5 157 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 CYP39A1Q9NYL5 469 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 FCHO1O14526 889 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 TSHRP16473 764 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 CSHL1Q14406 222 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 GRIK4Q16099 956 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 NFE2Q16621 373 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 CCDC33Q8N5R6 958 aa14.04□□□□□ -0.16
SMARCA4-202ENST00000413806 AAASQ9NRG9 546 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms