RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TARSP26639 723 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CAPGP40121 348 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 MAZP56270 477 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 DGCR6Q14129 220 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 LARS2Q15031 903 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 Q4G0T1 1027 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ATP13A4Q4VNC1 1196 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ABCA11PQ4W5N1 156 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 MARVELD2Q8N4S9 558 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 AADATQ8N5Z0 425 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 EPS8L3Q8TE67 593 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 RORBQ92753 470 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PRMT1Q99873 361 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 NUAK2Q9H093 628 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SCUBE2Q9NQ36 999 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PRDM9Q9NQV7 894 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ACOXLQ9NUZ1 547 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 EIF2B4Q9UI10 523 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 R3HDM2Q9Y2K5 976 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 DHRS7Q9Y394 339 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 C2CD2Q9Y426 696 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PMF1-BGLAPU3KQ54 211 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 C17orf113A0A1B0GUU1 675 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CHEK1O14757 476 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GNAO1P09471 354 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 FAM58BPP0C7Q3 252 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ATXN1P54253 815 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CACNB2Q08289 660 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 HEATR6Q6AI08 1181 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PDXDC2PQ6P474 469 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF367Q7RTV3 350 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 RAB43Q86YS6 212 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SUMF1Q8NBK3 374 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 OR2L3Q8NG85 312 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CCDC107Q8WV48 283 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SEC16BQ96JE7 1060 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 C9orf72Q96LT7 481 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 HSPA12BQ96MM6 686 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 FMO2Q99518 471 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SMAD5Q99717 465 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PIDD1Q9HB75 910 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 EPB41L4AQ9HCS5 686 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CNOT8Q9UFF9 292 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 KCNN3Q9UGI6 736 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SIX4Q9UIU6 781 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PTCH2Q9Y6C5 1203 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 OR2AT4A6NND4 320 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 KCNJ18B7U540 433 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CCRL2O00421 344 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GRAP2O75791 330 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZMYND10O75800 440 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GPC1P35052 558 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 YAP1P46937 504 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PRKAG1P54619 331 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 HNRNPKP61978 463 aaKnown RBP eCLIP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GUCY2DQ02846 1103 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SMARCB1Q12824 385 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 KCNJ12Q14500 433 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 NR1D2Q14995 579 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PON3Q15166 354 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZCWPW2Q504Y3 356 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CERCAMQ5T4B2 595 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 BHLHB9Q6PI77 547 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF589Q86UQ0 364 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CHSY1Q86X52 802 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ZZZ3Q8IYH5 903 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SLFN12Q8IYM2 578 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ESYT1Q9BSJ8 1104 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 OSBPL3Q9H4L5 887 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 VSX1Q9NZR4 365 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PCDHB4Q9Y5E5 795 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GAKO14976 1311 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 MYO3BQ8WXR4 1341 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 UGT2B11O75310 529 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 RPS6KA5O75582 802 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CHRNGP07510 517 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 DPEP1P16444 411 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GCSHP23434 173 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CD79BP40259 229 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 VLDLRP98155 873 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 POU5F1BQ06416 359 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PYDC2Q56P42 97 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SWT1Q5T5J6 900 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SYDE2Q5VT97 1194 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GIMAP6Q6P9H5 292 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 PET117Q6UWS5 81 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 AHSA2Q719I0 299 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 DGLUCYQ7Z3D6 616 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 GALNT7Q86SF2 657 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CAND1Q86VP6 1230 aaKnown RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 AMER2Q8N7J2 671 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CPNE2Q96FN4 548 aaPredicted RBP4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SENP7Q9BQF6 1050 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SUCNR1Q9BXA5 334 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 USP29Q9HBJ7 922 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CHPF2Q9P2E5 772 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 SH3BGRL2Q9UJC5 107 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 KIAA1257Q9ULG3 409 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 AGAP1Q9UPQ3 857 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 ICKQ9UPZ9 632 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms